Halobacterium sp. NMX12-1: ABSL23_16975
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Entry
ABSL23_16975 CDS
T10641
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_16975
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABSL23_16975
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABSL23_16975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7691
Motif
Other DBs
NCBI-ProteinID:
XCF18363
UniProt:
A0AAU8CHK0
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All DBs
Position
pNMX12-1_119:47902..51102
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AA seq
1066 aa
AA seq
DB search
MTSTLLTGSQHAHLEEAAFERAAEIAENSLGSVLYITRNDARRSEVEDNWATTHDSLSLR
AETLDAVVREWYEHLHGPVQPLSGQLNRRLAEYALDRTTAETDGALAGEPASAALADSFS
SRFSLFDDAGVGAPDALAAEFEGSALDDRIAKATVDAYRHYWDLHGDYVDEWVCTRGEMF
DAVATAEQSLSAFSPELDVVILSGYHEFRPVERRLIERLVDELPTIALLPLHQDGRSGVD
AVAEDALEVYEALDFETVELEPVDESGRAFGTITESLYRPDPDTVPAPDALRWRELPTPE
REIRFVARELRTELANGRDPDDLAVVVPGTEAYSGYVEDTFDTFDIPHVTTAASQLNQTF
TGSIVHDLLNLAEPDPRAEDLTSLLANPLVDVVDTDQANAVTASARRRDTVSVSPLLDDV
DDDAEALIEDLLSTLETVRTGNVEDATETLRRLLDGQFDVEAATEDYASGAEQAVEQRAY
DLVDEVLSSFESLEGVDSDLSPLALFTRAFDGVPIRVPQSAAGGHVEVMGLLDARMRSFE
KVVLVGLTSEHFPVTPERPAFFEEMTDAHPRFDTGDERLRGRYLFATLLANVDELTITTP
ETGDDESAVVRSPVLDELQRVTGIEPEGGVDDRVGSREDLQRHVAATDDRRAAVSRAGDR
GDLSPEQTKRTDRGLHCADNRGTAGLSEHDGVLDPETVDEVYPPSEREPYSASRIERYVE
CGFKFYADEVLGIEDPDDVEVVPTPLETGSYVHDVLERFFADLQDETEDGVDLTDFDRDE
LATHLREIAVEELRDADFEYHGLFYERWKAELFAGLGDDGSAPYDAGAKPHDAPEQGLFA
TFLDNELSRDGADRPHLFEAPFGEGLPDSDAGPFTVERPDGSTVSIRGYIDRVDVSRDGE
QPTLTLYDYKTGRAPYMTKTTGGTKFQLPIYLLAAAEVVDGDLFTERSLSATYYQVRPPN
DLKVPRGVESKFDSEVELRRFLNDVVPEWLGQIDEAIGNGRFHTTLLSARGANCRYCDYR
RACDVRHHRKQEFVDEVHKDDAAYVPLRVRDDEDIETVMSGRSAND
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgacctctacgctcctaactggttctcagcatgcacatttagaggaggcggcttttgaa
cgggctgcggagattgctgagaattcactagggagtgttctctacatcacccggaacgac
gctcgtcgaagtgaagttgaggacaattgggctacgacgcacgactctctcagtcttcgt
gccgagacgctcgacgcagtcgttcgggagtggtacgagcatctccacggtccggtccaa
ccgctctccgggcagctgaaccgtcggctcgcggagtacgcgcttgaccgaacaacagcc
gagacagatggcgctcttgctggcgaaccggcctctgccgccctcgctgattcgttcagt
agccgcttctcactcttcgacgacgccggcgtcggggcccccgacgcattggcagctgag
tttgagggctctgctctcgatgaccgtatcgcgaaagccactgtcgacgcgtaccgacac
tactgggatctccacggcgactatgtcgacgagtgggtctgtacccggggagaaatgttc
gacgccgtggcgacggcggagcagtcactatcggcgttctccccggaactggatgtcgtc
atcctttcggggtatcacgagttccgtcctgtcgaacgccgcctcatcgaacgcctcgtc
gacgaacttccaacgatcgcactgctgccacttcaccaagatggtcggagcggagtcgac
gccgttgcggaggacgccttggaggtctacgaagcacttgactttgaaacagtagaactc
gagcctgtcgacgagtcagggcgggccttcggtacgatcaccgagtcgctctaccgcccg
gatcccgacaccgtccctgctccagacgcgctccggtggcgtgaactcccgacgcccgag
cgcgagattcgcttcgtcgctcgcgagctccggactgagttggccaatggtcgcgacccc
gacgacctggctgtcgtcgtcccggggacggaggcctattcggggtacgtcgaggacacg
ttcgatacgttcgacatcccgcacgtcacgactgccgcttcacagctgaaccagacgttc
accgggagcatcgtacacgatctcttgaacctcgccgaacccgacccgcgtgccgaggat
ctcacgtccttgctggcgaatccactggtcgacgtcgtcgataccgaccaagccaacgcc
gtcacggcatctgctcgccggcgtgacaccgtttctgtatcacccctgctcgatgacgtc
gacgacgacgcggaggcactgatcgaggatctactgtccacattggaaacggtccgaacg
gggaacgtcgaagatgcgaccgagacgctccgccggctgctggacggtcagtttgacgta
gaggcagcaacagaggactacgccagcggcgccgagcaagctgtcgaacagcgggcctac
gatctcgtggacgaggtcctctcctcgttcgagtcgctggagggggtcgatagcgacctc
tctccgctggcgctgttcacccgtgctttcgatggtgtaccgattcgagtcccgcagagc
gctgctggcggccacgtcgaagtgatggggttgctcgacgcgcggatgcgatccttcgag
aaggtggttctcgtgggactgacgagcgagcacttcccagtgacgccggaacgcccggcc
ttcttcgaggagatgaccgacgcacatccgcggttcgacaccggcgacgagcgcctccgg
gggcgctatctcttcgcgacgctcctcgcgaacgtcgacgaactcacgatcaccacacca
gagacgggcgacgacgaatccgccgtcgtccggtccccggtcctcgacgaactccagcgc
gtgaccggcatcgaacccgaaggcggcgtcgacgaccgcgtgggatcccgcgaagatctg
cagcgacacgtcgctgcaacagacgaccggcgtgcggcagtcagccgcgccggcgaccgg
ggtgacctctcccccgagcagaccaagcgcacggatcgaggactccactgtgcggacaac
aggggaacggctggcctctctgaacacgatggcgtgttagatcccgagacagtcgatgag
gtataccctccgtcggagcgggaaccctacagcgcgagccgaatcgagcgatacgtcgaa
tgtgggttcaagttctacgccgacgaagttctcggaatcgaggaccccgacgatgtcgag
gtggtccccacaccgctcgaaaccgggtcgtacgtccacgacgtcctcgaacggtttttt
gcggatctgcaggacgagaccgaggatggtgtcgatctcacggacttcgaccgggacgaa
ctggcgacgcatcttcgcgagatcgctgttgaggaactccgggatgctgacttcgagtac
cacggcctgttctacgagcggtggaaagcggagctgttcgcgggcctcggtgacgatggg
agcgctccgtacgatgccggggccaaaccccacgacgcaccggaacaggggttgttcgct
accttccttgacaacgaactctcgcgggacggcgctgaccgaccacacttgttcgaggcc
ccgttcggcgagggacttcccgactcggatgctgggccgttcacagttgagcgaccggat
ggttcgaccgtctcgattcgtggatacatcgaccgcgtcgacgtgagccgggacggcgaa
caaccgacgctcacgctctacgactacaagactggacgggcaccgtatatgacgaagacg
accggcggcacgaagttccagctccccatctatctgcttgctgccgccgaggtcgtcgac
ggtgatctgttcacggagcgctcgctctcggcgacatactatcaggtgcgaccgccaaac
gacctcaaggttccacgcggcgtcgaatcgaagttcgattcagaggtcgaactccgccgg
ttcctgaacgatgtcgttccagagtggttgggccagatcgacgaggcgatcggcaacgga
cggttccacacgacgcttctgtccgcccgcggagcgaactgccgatactgtgactaccgt
cgggcgtgcgatgtccgccatcaccgcaagcaggagttcgtcgacgaggttcacaaggac
gacgcagcgtatgttccgctccgtgttcgcgacgacgaggacatcgagacggtgatgagc
ggtaggtcagccaacgattag
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