Halobacterium sp. NMX12-1: ABSL23_16985
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Entry
ABSL23_16985 CDS
T10641
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hanx Halobacterium sp. NMX12-1
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hanx03400
]
ABSL23_16985
Enzymes [BR:
hanx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABSL23_16985
DNA repair and recombination proteins [BR:
hanx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ABSL23_16985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF2800
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XCF18365
UniProt:
A0AAU8CI02
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All DBs
Position
pNMX12-1_119:52429..56070
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AA seq
1213 aa
AA seq
DB search
MTDASEEIQLTEEQEDALVQGRNVAITAGAGTGKTTTLTERYVTILAENPSLTPENIVTI
TFTRKAAAELTERVREEVYDRLEAVDSPEAYHRWRNVLDDLEDGYVHTIHAFCTRLLRER
AVEAPVPLGFDVLDEDGAATLQREVVTEFLERNQDDDDVALLAQLWGRDQLVDVLAGLLD
ERPQSEAVLEEWRDAEVDDYVDICWEVVCDLDVADARQTLYANGLLEQLRTVANRVDREA
DIADEDGLRAYRTFTEVATTLPDDPGESDSRDCQRAILDLYEACEKKNGGLYSSSGYVVG
DRDEWNEYGDVYDDLKDAIDAVIAAVEPHADAVETTPGELEANSAHYALALMRVFDDVLA
AYADEKERRDTLDFPDVIETTLEFLRTNDAVTERLREQFAAVMVDEFQDTDPRQWELIKL
LTGVDEQAASNVFLVGDEKQSIYGFRGADVTTFGDARRELQTVNEARGVDDVPDSEAESP
TALELSGNFRTLDEPLSFLNELFEYLFQPEGDRHEPYEAPPQELTTQRDRVEDIEGLTGS
VEYLAVPDDADTAAELFGDDHPVAEGALDHTIEAEAQALAARLTHLFDDPPQVQDPDTGA
HRDATPDDTAILLRRRTHLDRYQRALEEYNIPYTVVGGVGFYDTPEVQALTNLLRVLGDP
QDDVSLYGVLRSPLFGFTDDRLAPAVAVADSVWDALAETDDPQLSDAFDLLTTWRTLSGC
ATPSEDGVLPWNRLLSRVIDDTGYLASVSADERGRQAVANVEKFRDQVRTWSENGVHTAA
GLLHRIDRQAEIDPREGEADIPGDAEGVRIMTIHSAKGLEFPIVTVPDLGSDLNLGRSVD
DYGYVRLVDGTDDAPPVPAVGGPNPGDAFSIEKTAVHEYADRRSRPQERAESKRLLYVAC
TRTRDHLLLCGTHDIDVDESGAIELGEPAAFDDADRWRDWLQPALLDGALVAEAVRDGQA
RGEIDGASYTVRRPPRPVDWHTDDDAVDSAPEISIPSPPSLAPAKRIAATTLVNAVADAS
TDGHSYSQREESPGLSPTTFGTVVHRINELRPPRDEWPTLVRRLSRMAGEEPTESDLRDA
VDHAADAVEFVDQVEANSQLQAVYDEYSVVARIGESRIVGDIDRLLVTPDAFHIIDYKTN
DLSATTTDELAEHYRPQMLVYALALLQHSPDRSIRASLRFTDAGVEERFEWDPSECSVIE
SALRSMAELLPEN
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcctccgaggagattcagctcacagaggaacaggaggacgcgctcgtccag
ggccggaacgtcgcgatcactgccggcgccgggacggggaagacgacaacgctcaccgag
cggtacgtgacgatactggccgagaacccgtcactcacaccggagaacatcgtcacgatc
accttcacgcgaaaggctgctgccgaactgaccgagcgcgttcgagaggaggtgtacgac
cggctcgaagctgtcgactcaccagaggcctaccaccgctggcgaaacgtcctcgacgat
ctggaggacggctatgtccacaccattcacgcgttctgtacccggctcctgcgagaacgg
gccgtcgaggctccggtcccgctcggcttcgacgtactcgatgaagacggcgctgcgaca
ctccaacgcgaagtcgtgacggagttcctcgaacgcaaccaggacgatgatgacgtcgcg
ctcctcgctcagctttggggtcgtgaccagctggtcgatgtactcgctggattactcgat
gagcgcccacagagcgaggcggtcctcgaggagtggcgtgatgcggaggtcgacgactac
gtcgatatctgctgggaggtcgtttgtgatctcgacgtcgccgacgcccgacagacgctg
tatgcgaacggactccttgagcagctacgcacggtcgcgaaccgcgtcgaccgcgaggcc
gatatcgccgacgaggacggccttcgggcctaccggaccttcaccgaggtcgcgacgaca
ctcccagacgacccgggggaaagcgattcccgcgactgtcagcgggcaatcctcgacctc
tacgaggcctgtgagaagaagaacggcggcctgtacagcagttcggggtacgtcgtcggt
gaccgggacgagtggaatgagtatggtgacgtctacgacgacctgaaggacgctatcgac
gcggtcatcgcggccgtcgaaccgcacgcggatgcggtcgagacgacacccggtgagctc
gaagcaaacagcgcccattacgcgctggctctgatgcgggtcttcgacgacgtcctcgcc
gcctacgccgacgagaaagagcgtcgcgatacgctcgacttccccgacgtgatcgagacc
acccttgagttcttgcgaacgaacgatgccgtcacggagcggcttcgagagcagtttgcg
gccgtgatggtcgacgagttccaggacacggacccgcgacagtgggagttgatcaagctc
ctcacgggcgttgacgagcaggcggcgtcgaacgtcttcctggtcggcgacgagaaacag
agcatctacggattccgtggggccgacgtgacgacgttcggggatgcgcgcagagagctc
cagaccgtcaacgaggctcgtggggttgacgacgtccccgatagcgaggccgagagtccg
accgcgctcgaactctccgggaacttccggacgctggacgagccgctgtcgttcctgaac
gagctcttcgagtatctgttccagccggagggtgaccgccacgaaccctacgaagcgcca
ccgcaggagttgaccacgcaacgcgaccgtgtcgaggacatcgagggactgaccgggagt
gtcgagtatctcgctgtccctgacgacgctgacacggcggcagagctcttcggcgacgac
catccggtcgccgaaggcgcgctcgaccacaccatcgaggccgaagcgcaagcgctcgct
gctcgactgacccacctgttcgacgatccgccacaagtccaagaccccgacacgggtgct
catcgcgacgctacgccggacgacacagcaatcctccttcgccggcgaacccatctggat
cggtatcagcgcgcccttgaggagtacaatattccctacactgtcgtcggtggcgtcggg
ttctacgatacgcctgaggtccaggcgctcacgaacctgcttcgagtactcggtgatcca
caggacgatgtctccctctacggggtgcttcggtcgccgctgttcggattcaccgatgat
cgcctcgcaccggctgtcgcagtggctgattcagtgtgggacgcgctcgccgagacggac
gacccgcagctgtcggacgcgttcgatcttcttacgacgtggcggaccctcagcggctgt
gcgacgccgtccgaagatggcgtcctcccgtggaaccgcctgctgtcccgggtgatcgac
gacaccgggtatctggcaagtgtgagtgcagatgaacgcggtcgacaggccgtcgcgaac
gtcgagaagttccgcgatcaggtccgtacttggagcgagaacggtgttcacaccgctgcc
gggttgctccaccggatcgaccgccaagccgagatcgaccctcgtgagggtgaggcagat
attccgggtgacgccgagggtgtccggattatgacgatccattcagcgaagggcctcgag
ttcccgatagtcactgtccccgatctcgggagtgacctcaacttgggtcgctctgtggac
gactatgggtacgttcgactcgtggatggaactgatgacgcgccgccggtgccggcggtc
ggtgggccgaatccgggcgatgcgttctccatcgagaagacggccgtccacgagtacgcc
gaccgacggtcgcgtccacaggagcgggcggagtcgaaacgcctcctctacgtagcgtgt
acacgaacgcgggatcacctccttctctgtggcacgcacgacatcgacgtcgacgagtct
ggcgccatcgaactcggcgagcctgcagccttcgacgacgcagaccggtggcgcgactgg
ttacagccagccctccttgacggagctctcgtcgccgaggcggttcgtgacggacaggcc
cgtggtgagatagatggagccagctataccgttcgcaggccgccgcgcccagtagactgg
cacaccgatgacgacgctgttgattcagcgccggagatctcgattccttcaccgccgtcg
ctcgcgccggcgaaacggatcgcggccacgacgctcgtgaatgcggtggcggatgcgtct
acagacggccacagttactctcaacgtgaggagtcgccgggcctgagtccaacgacgttt
gggacggttgtccaccggatcaacgaactccggcctccgagagacgagtggcctaccctg
gtccgccgtttgagtcggatggccggtgaggagccgacagaatcagatctccgtgatgct
gtcgatcacgctgctgatgcggttgaatttgtggaccaggttgaggctaattcccagctt
caagcggtctacgacgagtattctgttgtcgctcgcataggtgagtcgcgaattgttggt
gatatcgaccggctgctcgttactccagacgccttccacattatcgactacaagaccaac
gacctctcagctacgacgacggatgagctcgcagaacattatcgaccgcagatgctcgtg
tacgcgttggctctcctacagcatagtcccgatcgcagtattcgtgcttcactccgattt
accgatgccggcgtcgaagaacggtttgaatgggacccgagtgagtgctctgtgatcgaa
tctgcccttcgttctatggctgagttgcttcctgaaaattga
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