Halobacterium sp. NMX12-1: ABSL23_17035
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Entry
ABSL23_17035 CDS
T10641
Name
(GenBank) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hanx Halobacterium sp. NMX12-1
Pathway
hanx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hanx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ABSL23_17035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hanx03000
]
ABSL23_17035
03021 Transcription machinery [BR:
hanx03021
]
ABSL23_17035
Transcription factors [BR:
hanx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
ABSL23_17035
Transcription machinery [BR:
hanx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
ABSL23_17035
RNA polymerase III system
TFIIIB
ABSL23_17035
RNA polymerase I system
SL1/TIF-1B
ABSL23_17035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
MINT_MID
Motif
Other DBs
NCBI-ProteinID:
XCF18273
UniProt:
A0AAU8CHB7
LinkDB
All DBs
Position
pNMX12-1_119:63331..63714
Genome browser
AA seq
127 aa
AA seq
DB search
MDKSDNLGEHPEAWNHGLTLPPVLTELSEEEFVSILPADDRLNLNAFAIGLGLEDIEYEP
EKFSGAIYYPQGLEAKIILFPRVVFSVADDEEESVRAINKILEKLEGLGLAEFSDVSTQT
GRIADFI
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
gtggataaatcagacaatcttggggagcaccctgaggcgtggaatcacggactaacactt
ccaccagtgttaacggagctttctgaagaggagttcgtcagtattctaccagcggacgac
cgtctaaacctgaatgcgtttgcgattggtcttggattagaagatatagaatacgagcca
gagaagttctctggcgcaatatactaccctcaagggttagaagcgaagataatccttttc
ccgagggttgtcttctccgtagcagatgatgaagaagagagtgtcagagcaatcaataaa
attcttgagaaacttgaggggcttggattagccgaattttcggatgttagtacgcaaaca
gggcggatagcggacttcatttag
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