KEGG   Halobacterium sp. NMX12-1: ABSL23_17035
Entry
ABSL23_17035      CDS       T10641                                 
Name
(GenBank) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hanx  Halobacterium sp. NMX12-1
Pathway
hanx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hanx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ABSL23_17035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hanx03000]
    ABSL23_17035
   03021 Transcription machinery [BR:hanx03021]
    ABSL23_17035
Transcription factors [BR:hanx03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    ABSL23_17035
Transcription machinery [BR:hanx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     ABSL23_17035
  RNA polymerase III system
    TFIIIB
     ABSL23_17035
  RNA polymerase I system
    SL1/TIF-1B
     ABSL23_17035
SSDB
Motif
Pfam: TBP MINT_MID
Other DBs
NCBI-ProteinID: XCF18273
UniProt: A0AAU8CHB7
LinkDB
Position
pNMX12-1_119:63331..63714
AA seq 127 aa
MDKSDNLGEHPEAWNHGLTLPPVLTELSEEEFVSILPADDRLNLNAFAIGLGLEDIEYEP
EKFSGAIYYPQGLEAKIILFPRVVFSVADDEEESVRAINKILEKLEGLGLAEFSDVSTQT
GRIADFI
NT seq 384 nt   +upstreamnt  +downstreamnt
gtggataaatcagacaatcttggggagcaccctgaggcgtggaatcacggactaacactt
ccaccagtgttaacggagctttctgaagaggagttcgtcagtattctaccagcggacgac
cgtctaaacctgaatgcgtttgcgattggtcttggattagaagatatagaatacgagcca
gagaagttctctggcgcaatatactaccctcaagggttagaagcgaagataatccttttc
ccgagggttgtcttctccgtagcagatgatgaagaagagagtgtcagagcaatcaataaa
attcttgagaaacttgaggggcttggattagccgaattttcggatgttagtacgcaaaca
gggcggatagcggacttcatttag

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