Halomonas sp. NyZ770: LG409_00045
Help
Entry
LG409_00045 CDS
T10914
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany00541
Biosynthesis of various nucleotide sugars
hany01100
Metabolic pathways
hany01250
Biosynthesis of nucleotide sugars
Module
hany_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LG409_00045 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hany01005
]
LG409_00045 (rfaD)
Enzymes [BR:
hany01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LG409_00045 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hany01005
]
Core region
LG409_00045 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
MAX_effector
KR
DUF6716
Motif
Other DBs
NCBI-ProteinID:
UDM07353
LinkDB
All DBs
Position
11166..12122
Genome browser
AA seq
318 aa
AA seq
DB search
MIVVTGGAGFIGANIVKALNARGRDDVMVVDDLRDGTKFVNLADCTLADYLDKDDFIARV
KAALRGETVDLPTIDAIFHEGACSDTTEWDGHYMMENNFEYSKVLLNYCEKLGIPFLYAS
SAATYGGSDVFKEAPEHEKPLNVYGYSKLLFDQHVRSRWNELTTQVVGFRYFNVYGPREQ
HKGKMASVAYHNHLQIRNGETLKLFGAYGGYEAGMQSRDFVYVGDVVDVNLWFLDNPSAS
GIFNLGTGRAEPFKAIGEAVIDFYGQGEIDYIPFPQELKGRYQSYTRADIGHLRAAGCDV
EFKTVAQGVKAYLEWLNG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggtaacaggcggcgccgggtttatcggcgccaatattgtcaaagcgctaaat
gctcgtggccgtgacgatgtgatggtggtcgacgacctgcgcgatggcaccaaattcgtc
aacctggcggactgcacgctcgccgactacctggacaaggatgatttcattgcccgggtg
aaagccgcgctgcgcggtgaaacggtggacctgccgaccatcgatgcgattttccatgag
ggtgcctgctcggataccacggagtgggacggccactacatgatggagaacaacttcgag
tactccaaggtgctgctcaactactgtgagaagctgggcattccgtttctgtacgcctcg
tcagcggccacctacggcggcagcgacgtgttcaaggaagcccctgagcacgagaaaccg
ctcaacgtctatggctactccaaactgctgttcgatcagcacgtgcgttcgcgctggaac
gagctgactacccaggtagtaggtttccgttatttcaacgtctacggccctcgagagcag
cacaagggcaagatggctagcgtggcgtaccacaaccatctccagatccgtaacggcgaa
acgctgaaactgttcggtgcctacggcggctatgaggcgggcatgcagagtcgcgatttt
gtctacgttggcgatgtggtcgacgtgaacctctggttcctggacaaccccagcgcgtcg
ggcatcttcaacctgggtacgggccgtgccgaacctttcaaggcgattggtgaagcggtg
atcgatttctatggtcagggcgaaatcgactatatcccgttcccccaggagctgaagggg
cgctaccagagctatacccgtgcggacatcggccacctgcgtgcagcgggatgtgatgtc
gagttcaagacggtggctcagggggtcaaggcctatctggagtggctgaatggctga
DBGET
integrated database retrieval system
