Halomonas sp. NyZ770: LG409_00725
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Entry
LG409_00725 CDS
T10914
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
hany Halomonas sp. NyZ770
Pathway
hany03030
DNA replication
hany03430
Mismatch repair
hany03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG409_00725 (ssb)
03430 Mismatch repair
LG409_00725 (ssb)
03440 Homologous recombination
LG409_00725 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hany03032
]
LG409_00725 (ssb)
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_00725 (ssb)
03029 Mitochondrial biogenesis [BR:
hany03029
]
LG409_00725 (ssb)
DNA replication proteins [BR:
hany03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LG409_00725 (ssb)
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LG409_00725 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
LG409_00725 (ssb)
Mitochondrial biogenesis [BR:
hany03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
LG409_00725 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
SSB_1
DUF3127
Pro-rich
Motif
Other DBs
NCBI-ProteinID:
UDM07478
LinkDB
All DBs
Position
161864..162463
Genome browser
AA seq
199 aa
AA seq
DB search
MARGINKVILIGNLGQDPEVRFTPSGTAVANLNLATSDTWMDRQSGQRQERTEWHRVVLF
NKTAEIAQQYLKKGSKVYIEGRLQTRKWQDQNGQERYSTEIVANDMQMLDGRSGDYQGGG
APQGGYAQQAPAQSAPPQQHYQQPPQQAPQQGGYAPQQNAAPQRGGAAPQQQPPAHQQNS
SYGAPDPGNFDDFDDEIPF
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcggtattaacaaagtcattttaattggtaatttgggccaggatccggaagtg
cgtttcactccgtccggtaccgcagtggccaacctgaatctggccacctcggacacctgg
atggatcgccagagcggtcagcgtcaggaacgtaccgaatggcatcgcgtggtgctgttc
aacaaaacggcggaaattgcgcagcagtacctgaaaaaaggctccaaagtctatatcgaa
ggtcgcctgcagacgcgcaaatggcaggatcagaacggtcaggaacgctacagcaccgaa
atcgtcgccaacgacatgcagatgctggatggccgcagtggtgactaccaggggggaggt
gctccgcaaggtggctatgcccagcaagcgccggcccagtctgcgccaccgcagcagcat
tatcagcagccaccgcagcaggctcctcaacagggtggctacgctccgcaacagaatgcc
gcgcctcagcgtggcggcgcggcgcctcagcagcagcctcccgcgcatcagcaaaacagc
agctacggcgctccggatccgggtaacttcgacgactttgacgacgaaattccgttctga
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