KEGG   Halomonas sp. NyZ770: LG409_02180
Entry
LG409_02180       CDS       T10914                                 
Name
(GenBank) DHHA1 domain-containing protein
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hany  Halomonas sp. NyZ770
Pathway
hany03410  Base excision repair
hany03430  Mismatch repair
hany03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hany00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LG409_02180
   03430 Mismatch repair
    LG409_02180
   03440 Homologous recombination
    LG409_02180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hany03400]
    LG409_02180
DNA repair and recombination proteins [BR:hany03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LG409_02180
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LG409_02180
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LG409_02180
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 CIDE-N
Other DBs
NCBI-ProteinID: UDM07737
LinkDB
Position
446080..447870
AA seq 596 aa
MTTVSPLSASHPRLEPRPLDEAVYMRAQAQGLSELQARLLASRLPGYTGELTPLVSPSLR
YLVHPEKLADGRRAAERIAQAVAEGESIGILTDYDVDGITSHVVIRRTLVELFGVPEHKL
HSLIGHRIHDGYGISLPLVERTLGLKPLPTLVITADCGSSDEPRIARLKAAGIDVVVSDH
HALPLEGPPPSAYACVNPTRSDCRYPDKTIAGCMVAWLLMSLARSVLVEWGALPDATPKL
SPWLSYVALGTVADCVSLGGSPANRAVVSHGLTLINRMDAACWRAMAARLGADSVPFNAE
TLAFQMGPRINARSRLDDPYAALHFMLAESDGVANRQLEVLDQDNQSRKAIEADMTEEAK
ALAVAALEANEPAIVVLLEDGHPGVQGIVASRLVQAYGRPALILTRAAAPNMLTGSGRSI
DGLHLRDALQRTFELAPEALPRFGGHSGAAGVGVPREQLAAFKAAFLQAVGEQLGNMPLY
PRLWTDGELSTAQLSLATLEEIETLGPYGREFEPPLFEGRFIVEALRPVGAEGSHLMMEL
SMGAVTSKAIWFRALTPGELPSFGVGDTLHCAYKLNRNRWRGREALQLMVEHASPV
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgacgacagtgtcacccctctcagccagtcaccctcgcctcgagcctcgtcccctggac
gaggctgtttacatgcgcgcccaggcgcaagggctaagcgagctgcaggcacgcctgttg
gcgtcgcggctgcccggctataccggcgagctaacgccgctggtgtcgcccagcctgcgc
tatctggtgcatcctgagaagctggccgatggtcggcgcgccgcggagcgtatcgcccag
gccgtcgccgaaggcgagtccatcggcatcctgaccgattacgatgtcgatggcatcact
tcccatgtggttatccggcgcactctggttgagctgtttggcgtgcccgagcataagctg
cacagcctgattggccaccgtattcacgacggctatggcatcagcctaccgctggtggag
cgtacgctcggcttgaagccgctgcccacgctggtgattaccgccgactgtggcagctcc
gatgagccgcgtatcgcgcgcttgaaagcggcggggatcgacgtggtggtcagcgaccac
catgcgctgcccttggaaggcccgccgccctcggcctacgcctgcgtcaaccccacccgc
agcgactgtcgctatccggataaaaccatcgcaggctgcatggtggcgtggctactgatg
tcactggcccgtagcgtgctggtggagtggggcgcgctgccggatgccacccccaagctc
tcgccctggctctcctacgtggccctgggcacggtggccgattgcgtctcgttggggggc
agccctgccaaccgagcggtggtcagtcatgggctgaccctgatcaaccgcatggatgcc
gcctgctggcgcgccatggccgcgcggctgggagccgacagcgtcccgttcaacgccgaa
accctggcgtttcagatgggcccgcgcatcaatgcccgctcgcggctggacgacccctat
gcagcgttgcacttcatgctggccgagagcgacggcgtcgccaatcggcagttggaggtg
ctggatcaggataatcagtcgcgcaaggccatcgaagccgacatgaccgaggaagccaag
gcgctggcggtcgcggctctggaggccaacgagcccgctatcgtggtgctgctggaagat
ggacaccccggcgtgcaggggatcgtcgcttcccgcctggtacaggcctatggccgtccg
gcgctgatactgacgcgggccgctgcgcccaacatgctgaccggttctggccgctctatc
gacggcctgcatctgcgcgacgcgctgcaaagaaccttcgagctggcaccagaggcgctg
ccgcgctttggcgggcacagcggtgccgcaggggtcggtgtgcctagggagcagttggcg
gccttcaaggcggcttttctgcaggccgttggcgagcaactgggcaacatgccgctctac
cctcgcctatggaccgatggcgagctgtcgacggcccagcttagcctggccacgctggaa
gagatcgagaccctgggcccctatggccgggagttcgaacctccgctgttcgaagggcgc
ttcatcgtggaggcgctgcgcccggtgggggccgaaggctcgcatctgatgatggagctt
tccatgggagcggtgaccagcaaggcgatctggtttcgcgccctgacgccgggcgagctg
ccctcgtttggggtgggcgacaccctgcactgcgcctacaagctcaaccgcaaccgctgg
cgcggtcgcgaggcactgcaattgatggtggagcacgctagccccgtttga

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