Halomonas sp. NyZ770: LG409_02180
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Entry
LG409_02180 CDS
T10914
Name
(GenBank) DHHA1 domain-containing protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03410
Base excision repair
hany03430
Mismatch repair
hany03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG409_02180
03430 Mismatch repair
LG409_02180
03440 Homologous recombination
LG409_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_02180
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LG409_02180
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LG409_02180
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LG409_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CIDE-N
Motif
Other DBs
NCBI-ProteinID:
UDM07737
LinkDB
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Position
446080..447870
Genome browser
AA seq
596 aa
AA seq
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MTTVSPLSASHPRLEPRPLDEAVYMRAQAQGLSELQARLLASRLPGYTGELTPLVSPSLR
YLVHPEKLADGRRAAERIAQAVAEGESIGILTDYDVDGITSHVVIRRTLVELFGVPEHKL
HSLIGHRIHDGYGISLPLVERTLGLKPLPTLVITADCGSSDEPRIARLKAAGIDVVVSDH
HALPLEGPPPSAYACVNPTRSDCRYPDKTIAGCMVAWLLMSLARSVLVEWGALPDATPKL
SPWLSYVALGTVADCVSLGGSPANRAVVSHGLTLINRMDAACWRAMAARLGADSVPFNAE
TLAFQMGPRINARSRLDDPYAALHFMLAESDGVANRQLEVLDQDNQSRKAIEADMTEEAK
ALAVAALEANEPAIVVLLEDGHPGVQGIVASRLVQAYGRPALILTRAAAPNMLTGSGRSI
DGLHLRDALQRTFELAPEALPRFGGHSGAAGVGVPREQLAAFKAAFLQAVGEQLGNMPLY
PRLWTDGELSTAQLSLATLEEIETLGPYGREFEPPLFEGRFIVEALRPVGAEGSHLMMEL
SMGAVTSKAIWFRALTPGELPSFGVGDTLHCAYKLNRNRWRGREALQLMVEHASPV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtgtcacccctctcagccagtcaccctcgcctcgagcctcgtcccctggac
gaggctgtttacatgcgcgcccaggcgcaagggctaagcgagctgcaggcacgcctgttg
gcgtcgcggctgcccggctataccggcgagctaacgccgctggtgtcgcccagcctgcgc
tatctggtgcatcctgagaagctggccgatggtcggcgcgccgcggagcgtatcgcccag
gccgtcgccgaaggcgagtccatcggcatcctgaccgattacgatgtcgatggcatcact
tcccatgtggttatccggcgcactctggttgagctgtttggcgtgcccgagcataagctg
cacagcctgattggccaccgtattcacgacggctatggcatcagcctaccgctggtggag
cgtacgctcggcttgaagccgctgcccacgctggtgattaccgccgactgtggcagctcc
gatgagccgcgtatcgcgcgcttgaaagcggcggggatcgacgtggtggtcagcgaccac
catgcgctgcccttggaaggcccgccgccctcggcctacgcctgcgtcaaccccacccgc
agcgactgtcgctatccggataaaaccatcgcaggctgcatggtggcgtggctactgatg
tcactggcccgtagcgtgctggtggagtggggcgcgctgccggatgccacccccaagctc
tcgccctggctctcctacgtggccctgggcacggtggccgattgcgtctcgttggggggc
agccctgccaaccgagcggtggtcagtcatgggctgaccctgatcaaccgcatggatgcc
gcctgctggcgcgccatggccgcgcggctgggagccgacagcgtcccgttcaacgccgaa
accctggcgtttcagatgggcccgcgcatcaatgcccgctcgcggctggacgacccctat
gcagcgttgcacttcatgctggccgagagcgacggcgtcgccaatcggcagttggaggtg
ctggatcaggataatcagtcgcgcaaggccatcgaagccgacatgaccgaggaagccaag
gcgctggcggtcgcggctctggaggccaacgagcccgctatcgtggtgctgctggaagat
ggacaccccggcgtgcaggggatcgtcgcttcccgcctggtacaggcctatggccgtccg
gcgctgatactgacgcgggccgctgcgcccaacatgctgaccggttctggccgctctatc
gacggcctgcatctgcgcgacgcgctgcaaagaaccttcgagctggcaccagaggcgctg
ccgcgctttggcgggcacagcggtgccgcaggggtcggtgtgcctagggagcagttggcg
gccttcaaggcggcttttctgcaggccgttggcgagcaactgggcaacatgccgctctac
cctcgcctatggaccgatggcgagctgtcgacggcccagcttagcctggccacgctggaa
gagatcgagaccctgggcccctatggccgggagttcgaacctccgctgttcgaagggcgc
ttcatcgtggaggcgctgcgcccggtgggggccgaaggctcgcatctgatgatggagctt
tccatgggagcggtgaccagcaaggcgatctggtttcgcgccctgacgccgggcgagctg
ccctcgtttggggtgggcgacaccctgcactgcgcctacaagctcaaccgcaaccgctgg
cgcggtcgcgaggcactgcaattgatggtggagcacgctagccccgtttga
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