Halomonas sp. NyZ770: LG409_03210
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Entry
LG409_03210 CDS
T10914
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_03210
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LG409_03210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_16
AAA_22
AAA_30
SLFN-g3_helicase
zf-tcix
DZR
AAA
DUF7577
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
UDM07928
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Position
655764..657581
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AA seq
605 aa
AA seq
DB search
MTYPEKAASGPPFSPDAPPQLRAYQQEAVKRVVHHFRATSDPAVVVLPTGSGKSLVIAEL
ARLARGRVLVLAHVRELVEQNHAKYQAYGLVADIFSAGLKRKEASRQVVFGSVQSVVRNL
AQFNDASFTLLVIDECHRVSLEEDSSYRQVIDHLQRHNPQLKILGLTATPFRLGQGFIYH
RHYHGMVRGGEKSFFTDCVFEQPLRLMVKQGFLAAPRRLDMAIEGYDFSALAPSSSGLFR
EEELNRVVAGSRATPGIIAQVVEQAADCQGVMIFAATVAHAEEIMGYLPADQSALITGAT
ASAERTALIDAFKARKLKYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRL
SPGKEACLILDYAGNPWDLYAPEVGEPRPDSDSEPVQVECPECGHANLFWGKRDGELVIE
HFGRRCQGLVEDDAGRRSQCTFRFRFKVCDACGAENDIAARRCHGCEKLLVDADDKLKEA
LRLKDAKVLRVSGMQLEATTNGRGLPRLKVTYHDEDGASLSEWFALETAAQRRAFYAVFL
RAHLRAPGVRWQPATPDDVVAAQSRLRHPDFVVGRKVGRHFQIRDKLFDYQGRYRKAAEA
AEMPH
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacataccctgaaaaggcggcctccgggccgcctttctcgcctgatgcgccgccgcag
ctgcgcgcctaccagcaggaagcggtcaagcgggtggttcaccactttcgcgccaccagc
gacccggcggtggtcgtgctgcccacgggcagcggcaagtcgctggtgattgccgagctg
gcgaggctggcccgtgggcgggtgctggtactggcccacgttcgcgagctggtggagcag
aaccacgccaagtaccaggcctatggcctggtagcggatatcttcagcgccgggttgaag
cgcaaggaggccagtcggcaggtggtgtttggctcggtgcagtcggtggtgcgcaacctg
gcgcagttcaacgacgccagcttcacgctgctggtaatcgacgagtgccatcgggtgtcg
ttggaggaggattccagctaccgccaggtgatcgaccatctgcagcgccacaacccgcag
ctgaagattctcggcctcaccgccacgccctttcggctgggtcaggggtttatctatcac
cgccactaccacggcatggtgcgcgggggagaaaagagtttcttcaccgactgcgtgttc
gaacagccgctgcgcctgatggtcaagcagggttttctggccgctcctcggcggctggac
atggccattgaggggtacgacttctcggcgcttgctccctcttccagcgggctgtttcgg
gaagaagagcttaatcgggtggtggccggaagccgtgccacgccgggcatcattgcccaa
gtggtcgagcaggcggccgactgccagggcgtgatgatttttgccgcgacggtcgcccac
gccgaagagatcatggggtatctgcctgccgaccaatccgcgctgatcaccggcgcaacg
gcctccgccgagcgcaccgcgctgatcgatgcgttcaaggcgcgcaagctcaagtatctg
gtcaacgtggcggtattgaccaccgggttcgatgccccacatgtggatctgatcgcgatc
ctgcgccccactgagtcggtgagcctctatcagcagatcgtggggcgcggactgcgcctc
tcgccggggaaggaggcgtgcctgatcctggattatgcaggcaacccctgggacctctat
gcccctgaggtaggcgagccgcgtcccgacagcgatagcgagccggtgcaggtcgagtgc
cccgagtgtgggcatgccaacctgttctggggcaagcgcgacggcgagctggtgatcgag
cattttggccgccgctgccaggggctggtggaggacgacgccggacgccgtagccagtgc
acctttcgctttcgcttcaaggtctgcgatgcgtgcggggcagagaacgatatcgctgcc
cgccgctgccatggctgcgagaagctgctggtggatgccgatgacaagctcaaggaggcg
ctgcggctcaaggacgccaaagtgctgcgggtgagcggcatgcagctggaggcgaccacc
aacgggcgcggcctgccgcgcctcaaagtgacctaccatgacgaagacggtgccagcctg
agtgaatggtttgccctggagactgccgcccagcgccgcgccttttatgcggtcttcttg
cgcgcccacctgcgcgcgccgggcgtgcggtggcagccagcaacgccagacgacgtggtg
gctgcccagtcccgcctgcgccatcccgactttgtggtgggcagaaaggtaggccgccac
tttcaaatccgcgacaagctgttcgactatcagggccgctatcgtaaagccgccgaggcg
gccgagatgccgcattga
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