Halomonas sp. NyZ770: LG409_04170
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Entry
LG409_04170 CDS
T10914
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hany03021
]
LG409_04170 (rpoS)
Transcription machinery [BR:
hany03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LG409_04170 (rpoS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UDM08109
LinkDB
All DBs
Position
860724..861698
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AA seq
324 aa
AA seq
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MSMLEKDLQEIDLDEVEEALDEADDDATAEEEEFEKALGRDDRQSTQSLDATQIYLNEIG
FSPLLTPEEEVYYGRLARKGDALGRSRMIESNLRLVVKIARRYLNRGLTLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRAARELT
QKLDHEATAEEIAEHLDKPVETVKKMLGLNERVSSVDYPMGGESDKPLIDTLTDDDVLGP
EACLVDGDVREHVDHWLDELSEKQREVVVRRFGLRGHEAATLEEVGAEIGLTRERVRQIQ
VEALKKLRRSLEKQGLSLDSIFEA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctggagaaggacctacaggagatcgacctcgacgaggttgaggaggcgctg
gacgaggctgatgacgatgccacggctgaggaggaagagttcgagaaagcgcttggtcga
gacgatcgccaatccactcagagtctggatgctacccagatctacctcaatgaaatcggc
ttttcgccgctattgacgccggaagaagaggtctattacggacgtctggcgcgcaagggt
gatgccttggggcgctcgcggatgatcgagtccaacctgcggttggtggtcaagattgcc
cgacgctatttgaatcgaggtttgacgctgctggatttgatcgaagagggcaacctcggg
ctgatccgcgcggtggaaaagttcgaccccgagcggggttttcgcttctccacttatgcc
acctggtggattcggcaaaccatcgaacgcgctttgatgaaccagacgcgcaccattcgt
ctgccgattcatgtggtcaaggagctgaacatctatctgcgtgccgcccgtgagttgacc
cagaagctcgaccacgaagccaccgcagaagagattgccgagcatctcgacaagccggtc
gagaccgtcaagaagatgctggggctcaacgaacgtgtttcctcggtggactacccaatg
ggcggcgagagcgacaagccactcatcgataccctcaccgacgatgatgtgctgggtccg
gaagcatgcctggtggatggagacgtgcgcgagcatgtcgaccactggctggacgagctc
agcgagaaacagcgcgaggtggtggtgcgtcgctttggcctgcgtgggcatgaagccgcc
acgctggaggaagtgggtgccgaaatcggtctgacccgcgagcgtgttcgtcagatccag
gtagaagcgttaaagaagttgcgacgctcgctggaaaaacaggggctttctctggattcg
attttcgaggcgtag
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