Halomonas sp. NyZ770: LG409_04570
Help
Entry
LG409_04570 CDS
T10914
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_04570
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG409_04570
Archaeal homologous recombinant proteins
LG409_04570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UDM08184
LinkDB
All DBs
Position
956498..959098
Genome browser
AA seq
866 aa
AA seq
DB search
MTPLTLTLQAFGPFARRDTIDFTALGKSPLFLINGPTGAGKSSILDAICFALYGQTTGNE
RDAGQMRCDQAAPDLLTEVTLTFRLRESTYRVRRVPQQERPKANGEGTTTQAAEAQLWRL
TPEGQEDECLVARKVTDANGQLQQLLGLDARQFRQVMVLPQGKFRELLLAGSKEREEIFA
QLFQTQIFQRIEQRLADQAKHIVREVNDHRQRVQGMLAASDVESEAALEAALAALAPDHQ
TARHDLALAAEQREQAVAAAQSAAALARQFAQHAALVNAKAALLVQQPAVQRAQQQLRQH
EQTQALATPFYARQSAQQNATAAQREWAAAEQAIAPRQAAHQQAQEALEAANAQYEQLPA
LQRQAYALEQSLDQCQALATLEKQQQALAQQVARARENAQQKQHAATQQEQHAIEQEMRW
HQGQAALLAEQLEGGQPCPVCGSREHPAPASTAQLLVTQEEVKQARSAHERARQAWVSAQ
QDAQRLEQQAEHVGEQCQKLREQLGDSASLESVNASLAAVKREMDTCERSWKTAQSQAQT
AHTAFTQAQTTLTQATQRQAEAQRTLEAAQAEWQTALQGSPFEDEQAFITARLDTAEQQR
LSDDVARFQRELARLEGQLEASAPLLEGKTPPDVAALDAQAGNSKAREEACRQHYQRLSA
RVDQLTATRQRLAEARNVEAALDEQYKLWGTLSEVANGRTGNRISLQRFVLGVLLDDVLI
QASARLVRMSRGRYQLVRREDPSKGNKASGLELDVADTYTGKNRPVATLSGGESFMAALA
LALGLSDVVQAYAGGIQLDTLFIDEGFGSLDQDALDQAIAMLSELQMSGRMIGIISHVSE
LKEQMPIRIDVLPSRQGSTVVVKGEG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctttgacactgaccctgcaggcctttggcccgtttgcccggcgtgacaccatc
gacttcaccgcgctgggcaaaagcccgctgttcctgatcaatggccccaccggtgctggc
aaaagctcgatactcgatgccatctgcttcgcactttacggccaaaccaccggcaatgaa
cgggacgctggccagatgcgctgcgaccaggctgcgccagacctgctcaccgaagtcacc
ctcacgtttcgcctgcgggaaagcacctatcgggtgcgccgcgtgccccagcaggagcgt
cccaaagccaatggcgagggtaccaccacccaggctgccgaagcccagctgtggcggctg
accccagagggtcaggaagacgaatgcctggtggcgcgcaaggtcaccgatgccaacggc
cagctgcagcagttgctggggctggatgctcgtcagttccgccaggtgatggtgctgccc
cagggcaagttccgcgagctgttgctggcaggctccaaggagcgcgaggagatttttgcc
cagctgtttcagacccagatcttccagcgcatcgaacagcgcctggcggaccaggccaag
cacatcgtgcgtgaggtgaacgaccaccgccagcgtgtacagggcatgctggcggccagc
gatgtcgagagcgaagccgccctggaagctgccctcgctgcgctggcccctgaccaccag
accgccaggcacgacttggccctggccgccgagcagcgggagcaggccgtggcggccgcc
cagtcggcggcagcgctggcccgccagttcgcgcagcacgccgcgctggtcaatgccaaa
gccgcgctgctggtgcagcagccggccgtgcagcgtgcccagcagcagctgcgtcagcat
gagcagacccaggccctggcaacaccgttttatgcccggcaaagcgcccagcaaaatgcc
acggcggcccagcgcgagtgggccgccgccgaacaggccattgccccgcgccaagcggct
caccagcaggctcaggaagcgctcgaggcggccaatgcccaatatgaacagctgcccgcc
ctgcagcgccaggcctatgcgctagagcaatccctcgatcagtgtcaggcattggccacg
ctggagaaacagcagcaagcgcttgcccagcaagtggcccgggcgcgcgaaaatgcacag
cagaagcagcatgcggccacgcaacaggagcagcacgccatcgagcaggagatgcgctgg
caccagggccaggcggctctgctcgctgagcagctggagggtggccagccttgtccggtg
tgtggcagccgtgagcatcccgcgcctgcctcgacggcccagctactggtcacgcaagag
gaggtgaagcaggcgcgcagcgcccatgagcgcgctcgacaggcatgggtgagcgcccaa
caagatgcccagcgcctggagcagcaggccgagcacgtcggtgagcagtgccagaagctg
cgtgaacagctgggcgatagcgcatcgctggagagcgtgaatgcctcgttagcggccgtg
aagcgtgagatggacacctgcgagcggagctggaaaaccgcccagagtcaggcccagacc
gcccacacggcgttcacccaggcgcaaaccacgctcactcaggcaacccagcgccaggcc
gaggcgcagcggacgctggaagcggcccaggccgagtggcaaacggccctgcagggtagc
ccctttgaggatgagcaggcatttatcaccgcccgtctggacaccgccgaacagcagcgg
ctgagtgacgacgtggcgcgctttcaacgggaactggccaggctggaagggcagctcgaa
gccagtgcgccgctgctggaaggcaagacgccgcccgacgttgctgctctcgatgcccag
gctggcaacagcaaggcccgggaggaggcgtgccgacagcattaccagcggctgagcgca
cgggtagaccagctcactgccacgcgacagcgattggcagaggcgcgcaatgtggaggcg
gccctggacgagcagtacaaactatggggtacgctcagcgaagtggccaacgggcgcacc
gggaatcgcatcagcttgcagcgcttcgtgctgggcgtgctgctggacgatgtgctgatt
caagcctccgcgcgccttgtgcgcatgagccgcgggcgctatcagttggtgcgccgagaa
gacccttccaaaggtaataaagcctctggcctggagctggacgtggccgatacctatacc
ggcaagaatcgcccggtggcgacgctttccggcggcgagtcgttcatggctgcgctggcg
ctggcgctagggctttccgatgtggtgcaagcctatgcaggcggtattcagctggatacg
ctattcatagatgaaggctttggcagcctcgaccaggacgcgctggaccaagccatcgcc
atgctcagcgagctgcagatgagcgggcgcatgatcggcatcatttcgcatgtcagcgaa
ctcaaggagcagatgccgattcgtatcgacgtgctgcccagccgtcagggcagcacggtc
gtggtgaagggtgaagggtga
DBGET
integrated database retrieval system
