Halomonas sp. NyZ770: LG409_05310
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Entry
LG409_05310 CDS
T10914
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LG409_05310 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_05310 (recC)
Enzymes [BR:
hany01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LG409_05310 (recC)
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG409_05310 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UDM08326
LinkDB
All DBs
Position
complement(1123195..1126758)
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AA seq
1187 aa
AA seq
DB search
MPANALLSPTSLTPGFMVVHANRLEDLRGLAVEWMRRHPLGPLENETILVQSNGIGQWLK
LALAEDPGNGGAGIAAALDVMLPARFLWQAYRRVLTHVSHDADAVPETSPFDKSCLVWRL
LRLLPTLAGQPVFEPLAQFLETDRDQRKHYQLAERLADLFDQYQVYRADWLDAWANGHDV
LITARGEHRPLEEHQCWQPALWRILRDDVAATQGDAGLNSSRAQVHQRFLKATEQLEGQA
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDLLRAQR
YRQRRKTGMPDTLDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDAGNYQTLF
EQQALRIDMFEPFSGEERHCLLSQLQDDIRELRPVAETQGQWPALPATDDSIVFHIAHGP
QREVEILHDQLLAAFSADPALRPRDIIVMVPDIDRYAPHIEAVFGQLPTDDPRHIPYTLS
DQASRHRLPLMIALEKLLRLPELRLTVSDVLDLLEVPALRQRFGLEERDLPVLERWMEGA
GIRWGLNAQQRQRLELPGGLSQNTWAFGLRRLLLGYTVGDGHAWQGIEPFDDIGGLEAGL
AGPLATLLEKLDATWETFCQPTDAATWVARLRALLETFFLTDDAQESIMLTKLENGLQQM
LESSQEAELDDPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKRVCLLG
MNDGDYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWMGRSQIDN
SPLPPSVLVGQLRDHLEAGWQTHTGAPLLESLTTEHPLQPFSRAYFNHPASRLFTYAHEW
RVVHAPRTPPAVERMLPAPENAPTSLSLAQLGGFLREPVRSFFNTRLGVYFEQETIAELD
AEPFALDGLQNWQLQDQLIAAQRHAVDHGQPRIEALHDALERFQGQGVLAMGAFGERMRD
ALADPMEELFNAYEEALTAWPHALPDAQVQFEAHGLTLEDPLGELRQDEAGQRCRLLLLS
SSLISQGSGRGQYRWSHLLRPWVAHLAGNLSGPMTSLLLSKAGHVTLEPVAADTARQHLE
TQLAAWQAGLQIPLPLAPQAGFAWLAKQGTPEIAQEKGRDSDAFAAAEAAYEGGYKVTGE
AAQSAYLSHQWPRFERLFFEQANGHTFATLTESLYAPLFFAVKGKKE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaatgccctgctctcccccacttcgctcacccccgggttcatggtggtacac
gccaatcggctggaggacttgcgggggctggcggtggagtggatgcggcggcacccgctg
gggccgctggagaacgaaaccattctggtccagagcaacggcattgggcagtggctgaag
cttgcgctggcggaagaccccggcaacggcggcgcgggcattgcagcggcgctggacgtg
atgctgcccgcgcggtttttatggcaggcctaccgccgggtgctcacccatgtttcccac
gatgccgacgccgtgccggaaacctcgccgttcgataaatcgtgcctggtgtggcggctg
ctgcgcctgctgcccaccctggccgggcagccggtgttcgaaccactggcgcagttcctg
gaaaccgaccgcgaccagcgcaagcattaccagctggccgagcggctggcggatctcttc
gaccagtaccaggtgtaccgcgccgactggctggacgcctgggccaacggccacgatgtg
ctgattaccgcccgaggcgaacaccgcccgctggaagagcaccagtgctggcagcctgcg
ctgtggcgcatcctgcgtgacgatgtggccgccacccaaggcgatgccgggctgaacagt
agccgcgcccaggtacaccagcgctttttgaaagccaccgaacagctggaaggccaggcc
tgcccgccaggactgccccgtcggctgatcattttcggtatttcgtcgctgccgcagcaa
accctggaagcgctggcggcgctctcccgctgctgccagatcgtgctgtgcgtgcacaac
ccctgccagttctactgggcggacatcatcgaacacaaagacctgctgcgcgcccagcgc
tatcgccagcggcgcaagaccggcatgcccgacacgctggacgtactgggcaccggcgat
gccgatgacgccctgcacctgcacgcccagccgctgctggccgcctggggcaagcagggc
cgcgactatctgcgcttactcgatgagcacgacgacgcgggcaactaccaaacgcttttc
gagcagcaggcgctgcgcatcgatatgttcgagccgttcagcggcgaggagcgccactgc
ctgctcagccagctgcaagacgatatccgcgagctgcgcccggtggcagaaacccaaggc
cagtggccagcgctgcccgccaccgatgactccatcgtgtttcatattgcccacggcccc
cagcgggaagtggagattctccacgaccagctgctggccgccttcagcgccgaccccgcc
ctgcgcccgcgcgatatcatcgtcatggtgccggatatcgaccgctacgccccgcacatc
gaagcggtatttggccaactgcccacggacgacccccggcatattccctacacgctctcc
gaccaggccagccgccaccgcctgccgctgatgatcgcgctggaaaaactgctgcgcctg
ccagagctgcgcctgacagtcagcgatgtgctcgacctgctggaagtgcccgccctgcgc
cagcgctttggcctggaagagcgcgacctgccggtgctcgagcgctggatggaaggcgcg
ggcatccgctgggggctgaacgcccagcagcgccagcggctggagctgcccggcgggctg
agccagaacacctgggccttcggcctgcgccgcctgctgctgggctacaccgtgggcgac
ggccacgcctggcaaggcatcgagcccttcgatgatattggcggcttggaagcgggcctg
gcagggccgctggccacgctgctggaaaaactcgacgccacttgggaaaccttctgccaa
cccaccgatgctgccacttgggtggcgcggctgcgggcactgctggaaaccttcttcctc
accgacgatgcccaggaaagcatcatgctcaccaagctggaaaacggcttgcagcagatg
ctggaaagcagccaggaagcagaactcgacgacccgctgccgctctccatggtgcgcgaa
cactggctggcacaaatcgatgaacacagcctttcccagcgctttttggccggagcggtc
aacttcgctaccctgatgcccatgcgcgccatccccttcaaacgggtgtgcctgctgggc
atgaacgacggcgactatccccgctcccagccaccgctggatttcgacctgatgggcagc
gactaccgtcccggcgaccgttcccgccgggaagacgaccgctacctgtttctcgaagcg
ctgctctccgcccgggaccagctctacatcagctggatgggccgcagccagatcgacaac
tccccgctgcccccctcggtactggtgggccaactgcgcgatcatttggaggctggctgg
caaacgcatacaggcgcgccgctgctggaaagtctcaccaccgaacacccgctgcagccg
ttcagccgcgcttacttcaaccacccggcaagccgcctgttcacctacgcccacgaatgg
cgggtagtgcacgctccccgcacgccgcctgcggtggagcgcatgctacccgcgccggaa
aacgcccccaccagcctctcgctggcccagttgggcggctttctgcgcgagccggtgcgc
agcttcttcaatacccggctgggggtctatttcgagcaggagacaatcgccgagctggac
gccgagcccttcgcgctggatggcctgcaaaactggcagctccaggaccagctgattgcc
gcccagcgccacgcggtggatcacggccaaccgcgtatcgaggcgctgcacgacgcgttg
gagcgctttcaaggccaaggggtactggccatgggtgccttcggcgagcgcatgcgcgat
gccctcgccgaccccatggaagagttgttcaacgcctacgaagaagcgctcacggcgtgg
ccgcacgcgctgccagacgcacaggtgcagttcgaggcccacggcctcacgttggaagac
cccctgggcgagctgcgccaggatgaggcaggccagcgctgccgcctgctgctgctcagc
agcagcctgatcagccagggcagcgggcgcggccagtaccgctggagccacctgctgcgc
ccctgggtcgcccacctggcaggcaacctcagcggcccgatgacctccctgctactttcc
aaagccgggcatgtcacactggaacccgtagccgccgacaccgcccgccagcacctggaa
actcagctcgccgcctggcaagcgggcctgcaaatcccgctgccgctggccccacaggcc
ggttttgcctggctggccaagcaaggcacgccggagatagcgcaggagaaaggccgagac
agcgacgcctttgctgccgccgaagccgcctatgaagggggttacaaggtcaccggcgaa
gccgcgcaaagcgcgtacttgagccaccagtggccccgattcgagcggctgtttttcgag
caggccaacgggcacacttttgccacactgaccgaatcactttacgcgccgctctttttc
gctgttaagggcaaaaaggagtaa
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