Halomonas sp. NyZ770: LG409_07270
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Entry
LG409_07270 CDS
T10914
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany00541
Biosynthesis of various nucleotide sugars
hany01100
Metabolic pathways
hany01250
Biosynthesis of nucleotide sugars
Module
hany_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LG409_07270 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hany01005
]
LG409_07270 (kdsB)
Enzymes [BR:
hany01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LG409_07270 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hany01005
]
Lipid A
LG409_07270 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
PALP
SAM_1
Motif
Other DBs
NCBI-ProteinID:
UDM08698
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Position
1592306..1593088
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AA seq
260 aa
AA seq
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MGSAAQFIAVVPARFGSSRLPGKPLLDIAGEPMVAHVWRRACESQAQRVIVATDDERIRE
AMQAYGAEVVMTRTDHPSGTDRLAEVAEQLSLAGDTLVVNVQGDEPLIPPVLIDQVAQRL
ADDPEAAMATLAEPIGDVDTLFNPNVVKVVRSLQGRALYFSRAPIPWDREQFKTQPDLLT
TDAWLRHIGIYAYRASFLATYRDLTASSLEQLEQLEQLRVLQHGHVIQVALAAAANPAGV
DTPEDLTRVRALLTSSEDRS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgggctctgcggcgcaattcatcgcggtcgtcccggcgcggttcggctcttcacggctg
cctggcaagccgcttctggatatcgccggtgagcccatggtggcccacgtatggcgtcgt
gcctgcgagagccaggcgcagcgagtcatcgtggccactgacgacgagcgtatccgtgag
gccatgcaggcctacggcgcggaagtggtcatgacccggaccgaccatccctccggcacg
gaccggctggccgaagtggccgaacagctctcactggcgggtgacacgctggtcgtcaac
gtgcagggtgatgagccattgattcctcccgtgttgatcgaccaggtagcccagcggctg
gcagacgatcctgaggcggccatggccactttggccgagcccatcggcgatgtggatacg
ctattcaaccccaatgtggtcaaggtggtgcgttcactgcaagggcgcgcgctctatttt
tcccgagcgccgatcccttgggacagagagcagttcaagactcagcccgatttgctcacc
accgatgcctggctgcgccatattggcatctacgcttatcgtgccagctttctggccacc
taccgtgatctgacggcgtccagcctggagcagttggaacagctcgagcagctgcgtgta
ttgcagcacggtcatgtcattcaggtggcgctggccgcggctgcgaacccggcgggggtc
gatacccctgaggacctgacacgggtacgcgccttgttgacgtcatcggaggatcgttca
tga
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