Halomonas sp. NyZ770: LG409_07565
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Entry
LG409_07565 CDS
T10914
Name
(GenBank) TRAM domain-containing protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hany03009
]
LG409_07565
Enzymes [BR:
hany01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LG409_07565
Ribosome biogenesis [BR:
hany03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LG409_07565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
Methyltransf_11
SAM_MT
RrnaAD
Methyltransf_23
FtsJ
DNA_methylase
Methyltransf_15
Methyltransf_31
Tt1218-like
DREV
HupF_HypC
Motif
Other DBs
NCBI-ProteinID:
UDM08753
LinkDB
All DBs
Position
1653576..1655015
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AA seq
479 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLTRTPSGRAAKEQTGELSGAPLVVERLAHDGRGVAHNAAGKT
VFIDRVLPGEKVEVAVHVTRKRFDEAHVKTLLTPSPLRVTPPCAHFGQCGGCDLQHMALD
TQRHHKREVVAELLARQGLAHDAIGLLHGQTTAYRRRARLGVKVDSQGKVHLGFRAASTH
RLVDIDTCPVLVPALQALIAPLRALLESLEAPRLVGHLELLATPDATVVLVRQLKVQPDD
ELRWQRFAEQHQVHVGAWLGRETPQLHWYGAPPLLRERVDMQALGIDASTLPSTLSLDFA
PGDFLQVNAEVNQQMVAQVVGWLAPKPGMVLLDLFAGIGNFSLPLAAAGARVHAVEGSQG
MVERLRDNAHNARDADAVLAVSAEQADLSNAEAVAKVLRQHPVDALVLDPPRSGAEAVCQ
ALGRHRIAKIAYVSCDPATLARDAAHLVHAGYAIKHVVVADMFVHTAHMETLMLFEYTG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgggtaagcggcggcctccacgccccgcctcgggccattcgggcctgaca
cgcacgccaagtgggcgagccgcaaaagagcagactggcgagctctccggtgcgccgctg
gtcgtcgagcggctggcccatgatggccgaggggtggcccacaacgctgccgggaagacc
gtgttcatcgaccgggtgctgcccggcgagaaagtggaggtcgcggtccatgtgacccgc
aaacgcttcgatgaggcgcatgtcaaaactctgctgactccctcgcccctgcgcgtgacg
ccgccctgtgcccactttggccagtgcggagggtgcgatttgcagcacatggcgctcgac
acccagcgccaccacaaacgggaggtggtcgctgagctgctggcacggcagggcctggcc
catgatgccatcggcttgctccacgggcagaccacggcgtatcgccgtcgggcgaggctg
ggtgtcaaggtggatagccagggcaaggtgcacctggggtttcgcgccgccagcacgcat
cggctggtagatatcgacacctgtccagtgctggtgcctgccttgcaggcgctcattgcc
cctctgcgagcgctgttggagagcctggaagccccgcgcttggtcggccacctcgaactg
ctggcgaccccggatgcgacggtcgtgctggtgcgtcagttgaaggtacagcctgacgat
gagctgcgctggcagcgtttcgctgagcagcaccaggtacatgtcggtgcctggctgggg
cgcgaaacgccccagctgcactggtatggtgcgccacctttgctgagagagcgcgttgac
atgcaggcgctgggcatcgacgccagcacactgccatccaccctgtcgcttgactttgcg
ccgggagattttttgcaggtcaatgccgaggtgaaccagcagatggtggcacaagtggta
ggctggttggcgcccaagcccggcatggtgctgctggatctgtttgccggtatcggcaat
ttcagcctgccgttggccgctgcaggcgcccgcgttcatgcggtcgaagggagccaaggc
atggtcgaacggctgcgcgacaatgcccataacgcccgcgatgccgatgcagtcctggcg
gtcagcgcggaacaagcggatctcagcaatgccgaggccgtggccaaggtgctgcggcag
caccccgtggatgcgctggtgctggatccgccgcgtagcggtgccgaggcggtgtgtcag
gcgctgggccgccatcgcattgccaagatcgcgtatgtttcctgcgacccggcaaccctg
gctcgcgatgcggcacatcttgtgcatgcagggtatgctatcaagcacgttgtcgtggcc
gacatgttcgtacatacggcgcacatggaaacgctgatgctgtttgaatatacgggctag
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