Halomonas sp. NyZ770: LG409_07840
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Entry
LG409_07840 CDS
T10914
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LG409_07840 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_07840 (nfo)
Enzymes [BR:
hany01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LG409_07840 (nfo)
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LG409_07840 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UDM08804
LinkDB
All DBs
Position
complement(1715287..1716147)
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AA seq
286 aa
AA seq
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MKYLGAHVSAAGGADQAVQRAVEIGATAFALFTKNQRQWQGKPLTDEAIAAFKQACRVHG
FAPEQILPHDSYLINLGHPEAEGLDKSRAAFIDEMQRCEQLGLTLLNFHPGSHLNKISEA
DCLSRIAESINLALEATQGVTAVIENTAGQGTNLGWRFEHLASIIEQVDDKRRVGVCIDT
CHAFAAGYDLRSAEATRATLDELGSVVGFEYLRGMHLNDAKSDFASRVDRHHSLGQGNIG
LAAFTTIMQDARIDGIPMILETIEPDIWAEELNWLRAQAPEAAPGR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatcttggtgcccatgtaagcgcggccggtggcgctgatcaggccgtgcagcgc
gcggtggagatcggggcgacggcgtttgccctgtttaccaaaaaccagcgtcagtggcag
ggcaaaccgctcactgacgaggccatcgcagccttcaagcaggcgtgccgcgtccatggc
ttcgcgccagagcagatcctgccccacgacagctacctgatcaatctggggcaccctgag
gcggagggcctcgacaagtcgcgggccgccttcatcgatgagatgcagcgctgcgagcag
ttgggcctgacgctgctgaacttccaccccggcagccatttgaacaagatcagcgaagcc
gactgcctgtcgcgcatcgccgaatccatcaacctggctctggaggccactcagggcgtg
accgcggtcatcgaaaacaccgcaggccagggcaccaacctgggctggcgcttcgaacat
ctggccagcatcatcgagcaggtggacgacaagcgccgggtcggcgtttgcatcgacacc
tgccacgcctttgccgcaggctacgacctgcgcagcgccgaggcgacccgcgccacgctg
gacgaactgggcagcgtggtggggttcgaatatctgcgcggcatgcacctcaacgatgcc
aaaagcgacttcgccagccgtgtggatcggcaccacagcctggggcaaggcaacattggc
ctggcggccttcaccacgatcatgcaggatgcgcgcatcgatggtattcccatgattctc
gaaaccatcgagcccgatatctgggccgaagagctgaattggctgcgcgctcaagccccc
gaggccgcccccggcaggtag
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