Halomonas sp. NyZ770: LG409_09055
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Entry
LG409_09055 CDS
T10914
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03030
DNA replication
hany03430
Mismatch repair
hany03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LG409_09055
03430 Mismatch repair
LG409_09055
03440 Homologous recombination
LG409_09055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hany03032
]
LG409_09055
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_09055
Enzymes [BR:
hany01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LG409_09055
DNA replication proteins [BR:
hany03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LG409_09055
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LG409_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
GIY-YIG
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UDM09020
LinkDB
All DBs
Position
1964526..1965914
Genome browser
AA seq
462 aa
AA seq
DB search
MNDTPLIFIDIETTGTRATRDRITEIAALKINGGHVVERWISLIQPTTGVPAHISRLTGI
DDAMLREAPTFACIAEELNGWLGRDTLVAHNARFDAGFLRNEFKRAEIAYRPKVICTLRL
ARRLAPQLPKHNLTALLAHYDVPRTNAHRAEEDVQALWGLWQTWQQRFDTPTWQAALADE
QRHRSLPAHLPSEQLAGLPEAPGVYLFYGHNRLPLYVGKSVNLRLRVLGHFQRDHQDDKE
MRLAQQIQHVEWEETAGDLSAQLREAQLVKQLMPIMNRQLRRQGKLHTWYWPDDAAQPTL
ANGKLLGQPQPGKLFGLFRSAKEAKEALRHLAEAHQLCPQVLGLDKGKGRCFAHQLGRCR
GACCGEETREAHTLRAQQALAGLQISAWPWPGRIILREQSRPTGPAAYHLIDHWCYLGSA
PSRQAALALKTPAGQFDMDTYRILNRFIRDAEQHGLSIEPLG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacgccactgattttcatcgacatagaaaccaccggcacacgcgctacccgt
gaccgcatcacggaaattgccgccttgaaaatcaacggcggtcacgtcgtggagcgctgg
atcagcctgattcagcccacaacgggagtaccggcccatatcagccgactgacaggaatc
gacgatgcaatgctcagggaggcgcccacctttgcttgcattgccgaggagctcaacggg
tggttggggcgtgacacgctggtggcgcacaacgctcgcttcgatgcaggcttcctgcgc
aacgagttcaaacgcgccgaaattgcttaccgacccaaggtgatctgcaccctgcgcctt
gccaggcgactggcaccgcagctgcccaagcacaatctgacggcattgctggcccattac
gacgttcccagaaccaacgcccaccgagcagaagaggatgtgcaagccctgtggggcctt
tggcaaacctggcaacagcggttcgatacgcccacctggcaggcggcgttggctgacgag
cagcgtcaccgcagcctgcccgcacaccttcccagcgagcagctggcggggctgccggaa
gcaccgggcgtctacctgttttatgggcacaaccgcctgccactctatgtgggaaagagc
gtcaatctgcgattgcgggtgctcggccacttccagcgtgatcatcaggatgacaaggaa
atgcgcctggcccagcagatccagcacgtggaatgggaggaaacggcaggcgacctgagc
gcccaactgcgagaagcgcagctggtaaagcagttgatgcccatcatgaaccgacagcta
cgccgccagggcaagctacacacctggtactggccggacgatgcggcgcagcccacgctg
gccaatggcaagctgctggggcaaccgcagccgggcaagctgtttggcctgttccgcagc
gccaaggaagccaaggaggcactgcgccacttggccgaagcgcatcagctctgcccgcag
gtattggggctggacaagggcaagggacgctgctttgcccaccagctggggcgatgccgg
ggggcgtgttgcggcgaggaaacacgagaggcacacacgctgcgtgcccagcaagcgctg
gcgggcctgcagatcagcgcctggccgtggcctggccgtatcattctgcgcgaacagagc
cgccccacgggtccggcggcctatcacttgatcgatcactggtgctatctgggcagcgcc
ccatcgcggcaggcggcgctggcgttgaaaacacctgccgggcagttcgatatggatacc
taccgcattctcaaccgcttcatccgcgacgccgaacagcacgggctgtcgatcgagccg
ctgggttga
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