Halomonas sp. NyZ770: LG409_11015
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Entry
LG409_11015 CDS
T10914
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany00071
Fatty acid degradation
hany00280
Valine, leucine and isoleucine degradation
hany00310
Lysine degradation
hany00362
Benzoate degradation
hany00380
Tryptophan metabolism
hany00410
beta-Alanine metabolism
hany00640
Propanoate metabolism
hany00650
Butanoate metabolism
hany00907
Pinene, camphor and geraniol degradation
hany00930
Caprolactam degradation
hany01100
Metabolic pathways
hany01110
Biosynthesis of secondary metabolites
hany01120
Microbial metabolism in diverse environments
hany01200
Carbon metabolism
hany01212
Fatty acid metabolism
Module
hany_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LG409_11015 (fadB)
00650 Butanoate metabolism
LG409_11015 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LG409_11015 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LG409_11015 (fadB)
00310 Lysine degradation
LG409_11015 (fadB)
00380 Tryptophan metabolism
LG409_11015 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LG409_11015 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LG409_11015 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LG409_11015 (fadB)
00930 Caprolactam degradation
LG409_11015 (fadB)
Enzymes [BR:
hany01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LG409_11015 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LG409_11015 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LG409_11015 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LG409_11015 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UDM05943
LinkDB
All DBs
Position
complement(2388728..2390914)
Genome browser
AA seq
728 aa
AA seq
DB search
MIYQGNAITVERRDTQGGNDVAVLTFDLKDESVNKLSSAVVAELGDAVKALQAASGVQGL
MIRSAKDVFIVGADITEFHSLFDKGEEYLVEMNLKVHDIFNAIEDLPYPTVTAINGLALG
GGCEVLLTTDYRVMSEKAKIGLPETKLGILPGWGGCVRLPRLIGADNAVEWIAGGTENRA
DAALKVGAVDAAVAHELLEEAALDILDRANAGELDYQARREEKTSPLKLNAIEQMMAFET
AKGYVAGKAGPHYPAPVEAIKVIQKGAGETRARAQAIEAKSFARLALSSVAFNLVGLFLN
DQVVKKKGSKYEKQSQPVKQTAVLGAGIMGGGIAYQSASKGTPILMKDIKDDAIELGLKE
ARKLFSKQVERKKLTTEQMAEKLSNIRPTLSYGDFGNVDLVVEAVVENPNVKDAVLTEVE
GMVGENTILTSNTSTISINRLAKNLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDAAVA
ATVAYARAMGKTPIVVNDCPGFLVNRVLFPYFGGFSFLVEQGADFQRVDKVMEKFGWPMG
PAYLLDVVGMDTAVHANEVMAEGFPDRMAREGKTAIQVMYDNQRLGQKNDKGFYAYEEDK
KGKPKKVSDEQAHALVKDVVKEQKEFSDEDIVARMMVPLCLETVRCLEDGIVETPAEADM
ALIYGIGFPPFRGGALRYIDALGVAEFVALADRLAEELGPLYAPTEKLRAMAQNNEQFYA
GSTASAQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcaatgccatcacggtggagcgtcgtgacacccagggtggcaatgat
gtcgcagtgctcactttcgacctgaaagatgagtccgtcaacaagctttccagtgccgtg
gtggcggagctgggagacgcggtcaaggcgctgcaggccgcaagtggtgtgcaaggtctg
atgatccgcagtgccaaggacgtgtttatcgtcggtgccgacattaccgaattccacagc
ctgttcgacaagggcgaagagtatctggtggagatgaacctcaaggttcacgatatcttc
aacgccatcgaagacctgccgtatcccaccgtgacggcgatcaatggactggcgctgggc
ggcggctgtgaagtgctgttgaccaccgactatcgcgtgatgagcgagaaagccaagatt
ggcctgccggaaaccaagctgggcattctgccaggctggggtggctgcgtgcgcctgccg
cgtctgatcggggcagacaacgccgtggagtggattgccggtggcaccgaaaaccgtgcc
gatgccgccttgaaagtaggcgccgttgacgctgccgttgcccatgagctgctggaagag
gcagcgctggacatcctcgatcgcgccaatgccggtgagctggattatcaggcccgccgc
gaagagaaaacctctccgctgaagctcaacgccatcgagcagatgatggccttcgaaacc
gccaaaggctatgtggccggtaaagcaggcccgcactacccggcgcccgtggaagccatc
aaggtcattcagaaaggggccggagaaacccgtgcgcgtgcccaggccatcgaagccaag
tccttcgccaggctggcgctgagcagcgttgccttcaacctggtggggctgttcctcaac
gatcaggtggtcaagaagaaaggcagcaaatacgagaagcagtctcagccggtcaagcag
actgccgtgctgggtgctggcatcatgggtggcggtatcgcctaccagagtgccagcaaa
ggcactccgatcctgatgaaagacatcaaggacgatgccatcgagcttggcctgaaagag
gctcgcaaactgttttccaagcaggtagagcgcaagaagctcaccactgagcaaatggcc
gagaaactctccaacatccgcccgacgctctcttatggcgatttcggcaatgtcgatctg
gtggtcgaagcggtggtggaaaaccccaacgtcaaggatgcggtgctgaccgaagtagag
ggcatggtgggtgagaacacgattcttacctccaacacgtccaccatttcgatcaaccgt
ctggcgaagaatctgaagcgcccggaaaacttctgcggtatgcacttcttcaaccccgtg
caccgcatgccgctggtggaagtcattcgtggcgagaaaacctccgacgccgccgtggcc
gccaccgtggcttacgcccgcgccatgggtaaaacgcccatcgtggtcaacgactgccct
ggctttctggtcaaccgcgtactgttcccttacttcggcggcttcagcttcctggtagag
caaggggccgacttccagcgtgtcgataaggtcatggagaagtttggctggcccatgggc
ccggcctacctgctggacgtggtcggcatggataccgccgtgcacgccaacgaggtaatg
gccgaaggcttccctgaccgcatggcgcgtgaaggcaaaaccgccatccaggtgatgtat
gacaaccagcgcctgggccagaagaacgacaagggcttctacgcctacgaagaggacaag
aagggcaagccgaagaaggtcagcgatgagcaggcccatgccctcgtgaaagacgtcgtg
aaagagcagaaagagttttccgacgaagacatcgtggcgcgcatgatggtgccgctgtgc
ctggagaccgtacgttgcctggaagacggcatcgtcgagacgcccgcagaagccgatatg
gcactgatttacggcattggcttcccgcccttccgcggtggcgcgctgcgctacatcgat
gcgctgggcgtggccgaattcgtcgctctggccgaccgtttggccgaagagttgggaccg
ctctacgcacctaccgagaaactgcgcgccatggctcagaacaacgagcagttctatgcc
ggttctactgctagcgctcaggcctaa
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