Halomonas sp. NyZ770: LG409_12850
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Entry
LG409_12850 CDS
T10914
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hany03016
]
LG409_12850
Enzymes [BR:
hany01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LG409_12850
Transfer RNA biogenesis [BR:
hany03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LG409_12850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1822
Motif
Other DBs
NCBI-ProteinID:
UDM09150
LinkDB
All DBs
Position
2773352..2775292
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AA seq
646 aa
AA seq
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MLQNNSLLAQLKQQIRETTPRAEGVIKATEKGFGFLETDSGESYFVPPPAMKQVLHGDRV
EAVIHENGDKKSVEPEKLIEAGLDRFIARVQKREGRLAVVPDHPSIRNVLKARIKNSLDE
DSIGDGDWVVARLVRHPLKENDRGFFAQIDELVAKVNNPAVPWRVTLARHALEQECPDAG
SDWPLRDEGLTREDLTQRPFFTIDGEKTRDMDDALHVVARPEGGWQLSVAIADPTAYVDE
EHAADLEARVRAFTVYLPGQNVTMLPEQLADDLCSLWEGQERPALACTLDINADGSLGDY
RFFAANVTSHAKLVYERVSDWIEGQGDWAPAEEIAEQLKALQAMTEARTAWRNEHALVFK
DRPDYVFDLDEAGNVLGVRTEDRRIANRMIEESMIAANACCADFLASHIGHGIFNVHRAF
EPEKAEAAQEFLASQEIDVAQEALTELAHYKELKRALESRDDAWLDARLRRFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAQNQDTFEAEIMAINRGGMRVRLIENGATAFVPAPLMHSDR
DKVVIDDKEGRIQIEGEERFKLGDSLRVSLTEAREETRSLVAKPAV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaataactccctgcttgcccagctcaagcaacagatccgtgaaaccactccc
cgcgccgaaggggtgatcaaagccaccgaaaaaggcttcgggtttcttgaaaccgacagc
ggcgaatcctatttcgtgccgccgcctgccatgaagcaggtgctccacggcgaccgcgtc
gaagccgtgattcatgagaacggcgacaaaaaatccgtcgagccggagaagctgatcgaa
gcgggcctggaccgcttcatcgcccgcgtgcaaaagcgcgaaggccgcctggcagtggtg
cccgatcacccctcgattcgcaatgtgctgaaagcccgcatcaagaacagcctggacgaa
gacagcattggcgacggcgactgggtcgtggcgcgtctggtgcgtcacccgctcaaggag
aacgatcgcggcttctttgcccaaatcgacgagctggtcgccaaggtcaacaaccccgcc
gtgccgtggcgtgtcaccctggcgcgccacgcgctggagcaggagtgcccggatgccggt
agcgactggccgctgcgcgatgagggcctgactcgggaagacctgacgcaacgccccttc
ttcaccatcgatggtgagaagacccgcgatatggacgatgccctgcacgtggtggcgcgt
ccggaaggcggctggcagctgagcgtggccattgccgaccccacggcgtatgtggatgag
gagcacgcggccgacctggaagcgcgtgtgcgtgccttcacggtttacctgccaggccag
aacgtcaccatgctgccggagcagctggccgatgacctgtgctcgctgtgggaaggccag
gagcgcccggccctggcgtgtacgctggacatcaacgccgacggcagcctgggcgactac
cgcttctttgccgccaacgtgacctcccacgccaagctggtgtacgagcgcgtctctgac
tggatcgaaggccagggcgactgggcaccggccgaagagattgccgagcagctcaaagcg
ctgcaggccatgacggaagcccgcaccgcctggcgcaacgagcacgcgctggtgttcaag
gaccgtccggattacgtgttcgatctggacgaagcaggcaacgtgctgggcgtgcgtacc
gaagaccggcgcatcgccaaccgcatgatcgaagagtcgatgattgcggccaacgcctgc
tgtgcagacttcctggccagccatatcggccacggcatcttcaacgtgcaccgcgccttc
gagcccgaaaaagccgaagcggcccaggagttcctcgccagtcaggagatcgacgtggcc
caggaagcactgaccgagctggcgcactacaaagagctcaagcgcgcactggaaagccgt
gacgacgcctggctggatgcccgcctgcgccgtttccagggcttcaccagcatgtcggcc
cagcctggcccacatttcggcctggggctgcccgcctacgccacgtggacctcgccgatc
cgcaagtatggcgatatggtcaaccaccgcttgatcaagcgcgtgctcaagggtgaacag
gccccggcagaggccagccagcagctcaccgagcagctcaccgaacgccgccgcctgaac
cgtatggccgagcgtgacgtgaaagattggctctacgttcgctacctgaccccggcagca
cagaaccaggataccttcgaggccgaaatcatggccatcaatcgtggcggcatgcgggtg
cgtctgatcgaaaacggcgccacggccttcgtgccagcccccttgatgcatagcgaccgc
gacaaggtggtgatcgacgataaagagggccgcattcagatcgaaggcgaagagcgcttc
aaactgggcgacagcctgcgtgtctcgctcacggaagcccgtgaagagacccgctcgctg
gtggcgaaacccgctgtttaa
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