Halomonas sp. NyZ770: LG409_13775
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Entry
LG409_13775 CDS
T10914
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hany01002
]
LG409_13775
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hany01011
]
LG409_13775
Peptidases and inhibitors [BR:
hany01002
]
Cysteine peptidases
Family C82
LG409_13775
Peptidoglycan biosynthesis and degradation proteins [BR:
hany01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LG409_13775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UDM06441
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Position
complement(2965515..2967152)
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AA seq
545 aa
AA seq
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MNDHPRLRQWAIGALLGLVLPGPLLAVAAEPAPPGMQQALSQQVERAGESLPVAAFYQLN
GGQPVWQDEARVVALVQGLNSLLDDGLTPEDYRATTLLEEFRASREWDAAAQARFDVDAT
RALLLALEHLSSGKVNPRQVEPGWDASRPERSYALPRVLSAVERHDVESALAMARPSSPE
YAQLRQALSTYRHLAEQGSVPYLPGREVSLRPGDRDPDVVTLRQRLTLWGASGLLGADSS
AYPMIGVQGAQRDQQLFDDTLVQAVKHFQRRHQLQEDGVVGERTRLALNMPVASRVDQLR
VNLERARWIRPSLQREPRVWVDIAGYRLHYLRPDGQQWDARVVVGTPRRETPVIHSTISH
LTINPSWTIPPTIMREDVLPRVREDIGYLAQQNIQVLSPSGEALDAQSIDWQRPGGVMLR
QVAGSRNPLGRVVVRFPNNDMIYLHDTPARGLFQRDQRALSSGCVRVEGVAEFAQMLLQD
SGSRHQLNALMNSGRSDQNVNLPQRIPVALHYLTAWPNPQGEVEFRDDIYRRDPALLSAL
SARDA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcatccgcgactaagacaatgggcgataggcgctctgcttggccttgtcctg
cccggccccttgctggcggtggcagcggagcctgctccccctgggatgcaacaagccttg
tcacagcaggtcgagcgggcaggggagtcgctgccggtggcagcgttttatcagctcaat
ggcgggcagccggtatggcaggatgaagcccgcgtggtggccctggtgcagggcctgaat
agcttgctggatgatggcctgacacccgaggattaccgtgcgacgacgctgctggaggag
ttccgtgccagccgcgaatgggacgctgccgcccaggcacgcttcgatgtcgatgccacc
cgagccctgttgctggcgctggagcatctatcgtcgggcaaggtcaatcctcgtcaggtc
gaacctggctgggatgcctcgcgcccagagcgcagttatgcgctgcctcgggtactgagc
gccgtggagcgccacgatgtcgagtcggcgctggccatggcccggcccagctcacccgag
tacgcccagcttcgtcaggcattgagcacctaccgtcacttggctgagcaaggcagcgtg
ccttacctgcccggcagagaggtctcgctgcgccctggcgaccgagacccggatgtggtc
acgctgcgccaacgactgaccctgtggggtgcctcggggctgttgggagctgacagcagc
gcctacccgatgattggcgtgcagggggcgcagcgtgatcagcagctgttcgatgacacc
ctggtgcaagcagtgaagcattttcagcgccgccaccagttgcaggaagatggtgtcgtg
ggggagcgtacccggctggcgctgaacatgccggtggcttcacgggtcgatcagttgcgg
gtcaacctggaacgtgcgcgctggatacgcccctccttgcagcgcgagcctcgggtgtgg
gtcgatattgcgggctaccggctgcattacttgcggcctgacggtcagcagtgggatgcg
cgagtggtcgtgggcacaccgcgtcgtgaaacgccggtcattcactccacgatcagtcat
ctgaccatcaaccccagctggaccataccgcctaccatcatgcgggaagacgtgttgcca
cgggtacgtgaggatatcggttatctggcccagcagaacatccaggtgttgagcccctca
ggagaagcgctggatgcccagagcatcgattggcagcgccctggaggcgtcatgctgcgt
caggtggcgggtagccgtaaccctctcgggagggtcgtggtacgctttcccaataacgac
atgatttatctgcacgacacgccggcacgcggcttgtttcagcgggatcaacgggcgttg
agttctggctgcgtcagggtggaaggcgtggcggagttcgcccagatgctgctacaggac
agcggcagtcgtcatcagctcaatgcgctgatgaacagtgggcgcagcgatcagaacgtc
aacctgcctcagcgcattcccgtggcgctgcattacctcaccgcctggcccaacccccag
ggggaggtagagtttcgagatgatatctaccgccgagacccggccctgctatcggcgctc
tccgctcgcgacgcctga
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