Halomonas sp. NyZ770: LG409_13995
Help
Entry
LG409_13995 CDS
T10914
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
hany Halomonas sp. NyZ770
Pathway
hany02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LG409_13995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hany03021
]
LG409_13995
Transcription machinery [BR:
hany03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LG409_13995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_11
NirdL-like_HTH
HTH_28
HTH_VMAP-M9
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
UDM06481
LinkDB
All DBs
Position
complement(3018104..3018655)
Genome browser
AA seq
183 aa
AA seq
DB search
MTIPPAVGHSAYHTGCRESLGQLYHHHQPWLQQLLRQRLGCGESAADLAQDAFVRLLKTP
RHFDSFDGTRAYLSRMAKGLCVDHWRRQDIERAWRETLAVRAEVDMPSVEHHQIVIETLC
EIDRMLAQLPEKVVSAFLASQLHGKPYRQIAEELGVSERMVKKYMAQAMLQCALIEAGFE
ASL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacgatccctcccgccgtcgggcactcggcttatcatacgggttgtcgagagtcactg
ggccagctctatcatcaccaccagccttggttgcagcagttgctcaggcaacggctggga
tgcggcgaatcggcggccgatttggcgcaggatgcgtttgtgcggttgctgaagacgccg
cgccatttcgatagtttcgatggcacccgagcctatctcagccgcatggccaagggactg
tgcgtggatcattggcgccgtcaggacatcgagcgagcctggcgagagacattggccgtc
cgcgcggaagtggacatgccctccgtcgaacaccatcagatcgtcatcgaaaccctgtgt
gaaatcgaccgtatgctggcgcaactgccggagaaagtcgtcagtgcctttctggcctcg
cagctacacggtaaaccctatcggcagattgccgaggagctgggggtttccgaacggatg
gtcaaaaaatatatggcgcaggccatgctgcaatgcgcgttgatcgaagcaggcttcgag
gcgagcctctag
DBGET
integrated database retrieval system
