Halomonas sp. NyZ770: LG409_17530
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Entry
LG409_17530 CDS
T10914
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
hany Halomonas sp. NyZ770
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hany02000
]
LG409_17530 (ybiO)
Transporters [BR:
hany02000
]
Other transporters
Pores ion channels [TC:
1
]
LG409_17530 (ybiO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UDM07141
LinkDB
All DBs
Position
complement(3808602..3810995)
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AA seq
797 aa
AA seq
DB search
MTSLRLLPWLGVWMLALFALLAGPAMAQTTLGGDNEAPDTSAEQPPSYSALADLLEDEQA
RQELIELLRHQASALPPGLANELSPEAAAAGGNVAPEDVSLPRQLAELTSRTVSDVGGQL
EQAVSIVGSLFTGQGAGTFNMADFTNAAINLGIVIIATFALFFTFRRLAKTLFTKLSAWS
LAGGSLTPVLRLVLCVALATVVDVLLVALAYVGGNLIATFAVGEAGELSTRASLFLNAFL
IIELLKAAVRMLFSSRYEGLRLLHISAQEASYWNRWIARLIGMVGYGLMVVVPLVNYYLA
PTLGQAVGTFIMLLAFVYAVAVVLKNRVRLRDNLNLMGDRSTLMASRVSLHLFARTWHLF
ALLYFLMVFVLTLTRPGDALPFVLMATLKTLVAVVVGLLLSTFLTQTIGRRIQLSDDLRR
KLPLLETRLNSYVPNALRVLRTIIVVAVIMVVLDAWGAFNLAAWYASERGANLVGNLISV
AVILIVSLGVWLGLASLIEHKLNPETGDGEPSARAKTLLSLFRNALAIAMVTITGMIVLS
EIGINIGPLIAGAGVLGLAIGFGAQKLVQDVITGVFIQIENAMNTGDVVTVGGVTGTAER
LSIRSVGIRDLSGTYHIVPFSSVDTVSNYMREYGNHVGEYGIAYRESIDDAIAQLQLAFE
DLKASEEHGHKLLADMTVAGVTALADSSVNIRVVIKTTPGDQWGVGRAYNRLVKMRFDSA
GIEIPFPHTTLYFGQDKSGSAPPANLRIMQQDFTIDGSPAGQPKRAELDVDDRHRPRRGQ
APSDQAAEHHKPDDEDV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcactacgtttattaccctggctaggcgtctggatgctggcgctgttcgcctta
ttggccggccccgccatggcgcaaaccacgctgggcggtgacaacgaagcgccggatacg
agcgccgagcagccgccctcgtattcggcgctggcggacttgctggaagatgagcaggct
cgccaggagctgattgagctgctgcgccaccaggcatcggcgctgcctccagggttggcc
aacgaactctccccggaagccgcggctgccggtggcaatgtcgcacccgaagatgtctcg
ctgccgcgccagctggccgaactgaccagccgcacggtgagtgatgtcgggggccagctg
gagcaggccgtctctatcgtcggcagcctgttcacggggcagggggccggcaccttcaat
atggccgacttcaccaatgccgcgatcaatctcggcattgtcatcattgccacgtttgcc
ctgttctttaccttccgtcgtctcgccaagacgctgtttaccaagctcagtgcctggtcg
ctggccggtggcagtttgaccccggtgctgcgtctcgtgctgtgcgtggcgttggccacg
gtggtggatgtgctgctggtggcgctggcctacgtgggcggcaacctgatcgccacgttc
gcggtgggcgaagcgggcgagctgtctacccgggcctcgctgttcctgaacgcgttcctg
atcatcgagctgctcaaggcggcagtgcgcatgctgttctcctcccgctatgagggactg
cggctgctgcatatttctgcccaggaagcctcctattggaatcgctggatcgcccgtctg
atcggtatggtgggctatggcctgatggtggtcgtaccgctggtcaactattacctggcc
ccgaccttggggcaggccgtgggcaccttcatcatgctgctggccttcgtctatgccgtg
gcggtggtgctgaagaaccgtgttcgactgcgtgataacttgaacctgatgggcgaccgt
tcgacgctcatggccagccgcgtgtcgctgcacctttttgcccgtacatggcacctgttt
gctctgctctacttcctgatggtgttcgtgctgaccctgacccgcccgggcgacgcactg
cccttcgtgctcatggccacgctgaaaacgctggtggcggtggtggtggggctgctgctg
tccaccttcctcacccagaccatcggccgtcgtattcaattgtcggatgacctgcgtcgc
aagctgccgctgctggaaacgcgcctgaacagctacgtgcccaatgccctgcgcgtgctg
cgcaccatcattgtcgtggctgtgatcatggtggtgctggatgcctggggagcgttcaat
ctcgccgcttggtacgcttccgagcgcggtgccaacctggtgggcaacctgatcagcgtg
gcggtcattctgatcgtatcgctgggcgtatggctggggctggcaagcctgatcgagcac
aagctgaaccccgagacgggcgacggggagccctcggcgcgtgccaagacgctgcttagc
ctgttccgcaacgcactggccattgccatggtgaccattaccggcatgatcgtgctgtcg
gagatcggcatcaacatcgggccactgattgccggtgccggtgtgctgggtctggcgatc
ggtttcggtgctcagaagctggtgcaggacgtcatcaccggcgtcttcatccagatcgaa
aacgccatgaacactggcgatgtggtgaccgtgggtggcgttaccggtacggccgaacgc
ctgagcattcgctcggtaggcattcgcgacctttccggcacctaccatatcgtgccgttc
tccagtgtggatacggtctccaactacatgcgtgagtacggtaatcacgtgggcgagtac
ggcattgcctaccgcgagagcatcgacgatgcgattgctcagctccagctggccttcgaa
gacctcaaggccagcgaagagcatggtcacaagctgctggcagacatgaccgttgcgggc
gtcaccgcgctggccgatagctcggtcaatatccgtgtggtcatcaagaccacgccgggt
gaccagtggggcgttggccgggcgtacaatcgcctcgtcaaaatgcgcttcgactcggcg
ggtatcgagattccgttcccgcataccaccctgtacttcgggcaggacaagtccggctca
gcgccgcctgccaacctgcgcatcatgcagcaggacttcaccatcgatggcagcccggcc
ggtcagcccaagcgagcagagctcgatgtggatgaccgtcatcgcccacggcgtggtcag
gcaccttccgaccaggctgccgagcaccacaagcctgacgacgaggatgtctga
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