Halomonas sp. NyZ770: LG409_17955
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Entry
LG409_17955 CDS
T10914
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany00300
Lysine biosynthesis
hany00470
D-Amino acid metabolism
hany01100
Metabolic pathways
hany01110
Biosynthesis of secondary metabolites
hany01120
Microbial metabolism in diverse environments
hany01230
Biosynthesis of amino acids
Module
hany_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LG409_17955 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LG409_17955 (dapF)
Enzymes [BR:
hany01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LG409_17955 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UDM07220
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All DBs
Position
complement(3886410..3887243)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVIDLVTQRARLRDEQIRQLADRRFGIGFDQLLIVEPPRDPDMDF
RYRIYNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLVLNVQHDGMVRVDM
GAPRFNPATLPFEATGDQPLHEVEVDGETLSLGVVSMGNPHAVLQVEDVERAPVERLGPL
LESHPRFPKRVNVGFMQVVSPNEIRLRVFERGSGETLACGTGACAAVASGIRQGLLKSPV
KVSLPGGQLSIEWPGPEASLVMVGPATRVFDGRVSLN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcacttcaccaagatgcacgggctgggcaacgacttcatggtgatcgatctg
gtcacccagcgtgcccgcctgcgcgacgagcagatccgccagttggcggatcgtcgcttt
ggcatcggctttgaccaactgctgatcgtcgaacccccgcgcgacccggacatggacttt
cgttatcgtatctacaacgccgacggtagcgaggtggaaaactgcggcaacggagcgcgc
tgctttgcccgcttcgtgcgtgaccagcgcctgacccacaagcacgaaattcatgtcgag
accgctggcggcccgctggtactcaacgttcagcacgatggcatggtgcgggtggacatg
ggcgcgccgcgcttcaatccggccacgctgcccttcgaagccaccggcgaccagcctctg
cacgaggtggaggtagacggtgaaacgctctcccttggagtggtttccatgggcaacccc
catgccgtgctccaggtcgaggatgtcgagcgtgcgcccgtcgaacggctgggtccgctg
ctggagtcgcatcctcgctttcccaagcgcgtcaacgtgggcttcatgcaggtcgtgtcg
cccaacgagattcgcctgcgggtcttcgagcgaggcagcggtgaaacgctagcctgcggg
accggggcctgtgcggcggtggccagtggcattcgtcaggggctactgaaaagtccggtc
aaggtctccctgccgggtggccagctgagtatcgagtggcctggcccagaagcctcgctg
gtcatggtggggcccgctacccgagtgttcgacggtcgggtatcactcaactga
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