Halomonas sp. NyZ770: LG409_18025
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Entry
LG409_18025 CDS
T10914
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hany Halomonas sp. NyZ770
Pathway
hany03420
Nucleotide excision repair
hany03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hany00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LG409_18025 (uvrD)
03430 Mismatch repair
LG409_18025 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hany03400
]
LG409_18025 (uvrD)
Enzymes [BR:
hany01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG409_18025 (uvrD)
DNA repair and recombination proteins [BR:
hany03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LG409_18025 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LG409_18025 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UDM07232
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All DBs
Position
3901650..3903848
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AA seq
732 aa
AA seq
DB search
MDDVTAILDHLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLGISMRHVWVGTFHSISHRLLRTHWQDARLPQHFQIIDSDDQ
LRLIKRLLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVNGDAYLAQMVELYERYQF
TCERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGQ
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPNTHTVRLEQNYRSTSAILEAANTLISH
NSERLGKNLWTDGAEGEPISVYAGFNDLEEARYIVDTIKEKVNEGFNRRDVAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHHAREQSVSLWQALHDTLQDGTLRGRAGNAVQAFTNLIEQLDNDTSGLPLHE
IIDHVTARTGLIEHHQSERGEKGQARVENLEELVNAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSVEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHVSRP
VTASRPSFAQSSIESDGDLPALHVGQRVGHPVFGEGIILNAEGEGARARVQVSFDGEGVK
WLVLGFAKLTPM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatactcgatcatctcaacccggcccagcgggaagccgtcagt
gcgccccagggcaaccttctggtactggccggtgccggttccggcaaaacgcgtgtactg
gtccaccgcattgcctggctgatgcaggccgaagggctttccccttatgccctgctggcc
gtcacgtttaccaacaaggccgcccgcgagatgcgcacgcgtctggaagccttgctgggc
atctccatgcgccatgtctgggtgggtacctttcactcgatctcgcaccggctgctgcgc
acccattggcaggatgcccgcctgccccagcactttcagatcatcgactccgatgaccag
ctgcggctgatcaagcggctgctgaaagactactcgattgacgatgagcgcttcccgcca
cgccaggtgcaggggttcatttctggttgcaaggaagagggcctgcgaccccatcaggtg
aacgtcaatggcgatgcgtacctcgcccagatggtcgagctctacgagcgctaccagttc
acctgcgagcgaggcgggctggtggatttcggtgagctgctgctgcgcagcctggagctg
ttgcgcgacaacccgccgctgctgaaccactatcgcgagcgctttggccatgtgctggtg
gacgagtttcaggataccaacacccttcagtacgcctggctcaaactgctcaccggccag
cagaccccgatgaccgccgtgggcgatgacgaccagtccatttacggctggcggggcgcc
aaggtcgagaacattcgccgcttcgaagaagagtttcccaacacccataccgtgcgcctg
gagcagaactaccgctccaccagcgcgattctggaagcggccaatacgctgatcagccac
aacagcgagcgtctcggcaagaacctctggaccgatggcgccgaaggcgagcctatctcg
gtgtatgcggggttcaacgacctcgaggaagcccgctatatcgtcgataccatcaaggag
aaggtcaacgaaggcttcaaccgccgggacgtggccatcctctaccgctccaacgcccag
tcgcgcctgctggaagagacactgattcgccaaggcatgccctatcgtatctacggcggc
caccgcttttatgagcggctggaaatcaagaacgccctggcctacctgcgcttgctgctc
aaccgtgatgacgatgcctccctggagcgcgtcatcaacgtgcccacccgtggcatcggc
acgcgcaccgtggaaatcgtccgccatcacgcccgtgagcagagcgtgtcgctgtggcaa
gcgctgcacgacacccttcaggatggcaccttgagaggccgtgcaggcaacgccgtacag
gcctttaccaacctgatcgagcagctggacaacgacacgtccgggctgccgctccacgag
atcatcgaccacgtcacggcgcgcaccgggctgatcgaacaccatcaaagcgagcgcggt
gaaaaaggccaggctcgggtcgagaacctggaagagctggtcaacgcagcccgggccttt
acccatggcgatgccttcgagaccccggaagccggagaaggcatggccgcgctggaagcc
ttcctttcggaagccgccctcaacgcaggcgaccatgaagccgaggagttcgaagacagc
gtgcagctgatgaccctgcactcggccaaggggctggagttcccggtggtgttcattgcc
ggggtggaagaggggctgtttccccacaagatgtccgtggaggagccaggccgcctggag
gaggagcgccgcctgtgctacgtgggcgtgacgcgcgccatgcagaagctctacctgacc
cacgccgagactcgccgcctgcacggcaaagaggtgtttccccgcccctcccggtttctc
cgtgagctgccgcctcatctgctggaagaagtgcgtctgcgcggccatgtctcgcgcccc
gtgaccgcgtcacggcccagctttgcccaatccagcatcgaaagcgacggcgacctgccc
gccctgcatgtcggccagcgggtgggccacccggtgttcggcgaaggcatcattctgaac
gccgaaggcgaaggcgctcgggcgcgggttcaggtgagctttgacggcgaaggcgtgaag
tggctggtactcgggtttgccaagctcactcccatgtaa
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