Halothece sp. PCC 7418: PCC7418_0752
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Entry
PCC7418_0752 CDS
T02379
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hao
Halothece sp. PCC 7418
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hao03016
]
PCC7418_0752
Enzymes [BR:
hao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PCC7418_0752
Transfer RNA biogenesis [BR:
hao03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PCC7418_0752
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AFZ42971
UniProt:
K9Y7R3
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Position
complement(837288..839291)
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AA seq
667 aa
AA seq
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MEKGTLIEFKAQGERRLAVAERPEGKKHWIVLDQWGQSHTLHPRQVEYEVGGDPKRPQDI
SAFLREVEAYLDPSSLEVAWELLVEDGEAVTPEDMAEVLFSDQSAAPCYAAYSLLAEDKI
YFKQKGNVFEPRSASQVAEIKHQIEVEQQRNQEKAEFIRRVQQALAGEAVEWQSSDRARL
EALERYILQPEQEVRLAQETLAEIGRSPTPDAAFTLLVDLGLWSRHENLFLRRSSYPKQF
PKKVLDVAQQYLETPPDDSEYNRADLTQQKVYTIDDESTKEIDDGVSIETLEDGRQQIWI
HIADPTRLVQPEDELDQEARRRSTSLYLPTGMIPMFPSELATGPMSLVQGQICPAMSFGV
ILEANGEISDYTIAASWVKPTYRLTYEDVDEMLELGVTAEPEIAQLAQWAQQRKQWRQSQ
GSINISLPEAVIKVSQEEEVEIELLDDSPARQLVAEMMILTGEVAARFAIDHEIPLPFRS
QPQPELPPEEELLQLPAGPVRYCAIRGCMPRSEMSTTPARHAGLGLEVYTQVTSPIRRYV
DLLGHFQIKAYLRGEPCPFSAEQVQEIAYSAGSAAYEATLVERQTKRYWALEYLRRNGEQ
RWSAIVLRWLREEDNLGIILLEDLGLELPHRFQTNVDLGDRVEVEVVAADPHQDLIRFRE
FVESTVN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaacgttaatcgaatttaaggctcaaggcgagcgtcgtcttgcggttgct
gaacgaccagaaggaaaaaaacattggattgttttggatcaatggggtcagtctcacacc
ctacacccacgacaagtggagtatgaagtgggaggcgaccccaaacgcccccaagatatt
tcagcgtttttaagagaagttgaagcctatttagacccatccagcttagaagtggcttgg
gaattactggtggaagacggagaagcggtcacaccagaagacatggcagaagttttgttt
tcagaccagagtgcagccccctgttatgcagcttactcgctgttagccgaagataagatt
tattttaagcagaaagggaatgtgtttgaaccgcgctcagcgtcacaggttgcggaaatt
aaacaccaaattgaagttgaacagcaacggaatcaagaaaaagcagaatttattcgtcga
gtccaacaggcgttagcaggggaagcggtagaatggcaaagcagcgatcgcgctcgcttg
gaagctctagaacggtatatcctccaacccgaacaagaagttcgtctggcgcaagaaacc
cttgcggaaattggacgctcacccacccctgatgcagcatttaccctgctggttgacctc
ggcttatggagtcgccatgaaaaccttttcttgcgtcgtagctcctatcctaaacagttc
ccgaaaaaggtgttagatgtggcgcaacaatatttagagactcctccagatgatagcgag
tataatcgcgcagacttgacccagcaaaaggtttataccattgatgatgaaagcacaaaa
gaaattgatgatggggtcagtattgaaaccttagaagatggacgacagcagatttggatt
catatcgctgatcccactcgcttggtgcagcctgaagatgaactggatcaagaagcccgc
cgacgcagcaccagtttgtatctccccacggggatgattcccatgtttccttcagaactt
gctactggccccatgagcttagtccagggacaaatttgtcctgcgatgagttttggggtg
attttagaagccaatggggaaatttcagactataccattgcagcgagttgggtgaaaccc
acttatcgccttacctatgaggatgtggatgaaatgctagagttgggcgtaactgcagaa
cctgaaattgctcaactggctcagtgggcacaacaacggaaacaatggcgacagtctcaa
gggtcaattaatattagcttaccggaagcggtgattaaagtgagtcaggaagaagaagtg
gaaattgaactcttagacgactctcccgcccgtcaactggtggcggaaatgatgattctg
acgggagaagtggcagcccgatttgccattgatcacgagattccgctaccgtttcgctcg
caaccgcagccagaattacccccagaagaagagttattacaattacccgcaggaccggtt
cgttattgcgcgattcgcgggtgtatgcctcggagtgaaatgagtaccaccccggctcgt
catgcgggtttagggctagaagtttatacgcaggtgacttctcccattcgccgttatgtg
gacttgcttgggcattttcaaattaaggcttatttgcgcggtgaaccttgtccgttttcg
gcggaacaagtgcaggaaattgcttatagtgcggggagtgctgcttatgaagcgactctg
gtggaacggcaaaccaaacggtattgggcgttagaatatctgcgtcgcaatggggaacaa
cgctggagcgcgatcgttctgcgttggttacgggaagaggataatttggggattatcttg
ttggaagatttaggcttagagttaccccatcgcttccagacgaatgttgacctcggcgat
cgcgtggaagtagaagtggtcgctgctgatccccatcaagatctcattcgcttccgagag
tttgtcgaatcaacggttaactag
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