Halothece sp. PCC 7418: PCC7418_0989
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Entry
PCC7418_0989 CDS
T02379
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
hao
Halothece sp. PCC 7418
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hao03021
]
PCC7418_0989
Transcription machinery [BR:
hao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PCC7418_0989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_3
HTH_Crp_2
HTH_8
HTH_23
HTH_17
HTH_30
HTH_24
Xre-like-HTH
MarR_2
HTH_Tnp_ISL3
KORA
HTH_11
LacI
DUF134
Crp
Spectrin_Dys-1
SpoIIID
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AFZ43197
UniProt:
K9Y9R1
LinkDB
All DBs
Position
1073936..1074703
Genome browser
AA seq
255 aa
AA seq
DB search
MSSLTSGHLKQNSLELLRIYQSDQNPKIRNQIVELNIGLVRKEAHHWVNQCNESYEDLIQ
VGCMGLIRAIERFELSKGNAFSSFAIPYIRGEIQHYLRDRSTSVKIPRRWLELRQQASKV
TCQLRSQLKREPTDHEIALQLNVSLKEWQDIKLAAKNREPLSLDMPMGSGDGEESTSLGE
LVPDAQYRSFQLAQEDQIRLQQGLIGLEERTRKVLEFVFLHDLTQKEAAEVLGVSVVTVS
RRLKKGINLLKNKMS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttgacctctggacacctgaaacaaaatagcttggagttactaaggatttac
caaagtgatcaaaatccgaaaattcggaatcagattgttgaactgaacattggcttagtc
cgcaaagaagcccatcattgggtcaaccaatgcaatgaaagttacgaagatttaattcag
gtgggttgcatgggattaatccgtgcgatcgagcggtttgaactgtcaaaagggaatgct
tttagttcctttgctatcccttacattcgaggggagattcaacactatttgcgcgatcgc
agcacttcagttaaaatccccagacgctggttagaactcagacaacaggcgagcaaagtg
acttgccaattgcgctctcagttgaaacgtgagcccaccgatcacgaaattgctcttcaa
ctcaatgtttccctaaaagaatggcaagacatcaaacttgctgctaaaaatcgagaaccc
ttgagtttagatatgcccatgggttcaggagatggagaggaaagcactagcctaggagag
ttagttcctgatgctcagtatcggagttttcaactcgctcaagaagaccaaattcgatta
caacaaggattaattggactcgaagaacggacgcgaaaagttttagagtttgttttcctt
catgacctgactcaaaaagaggcagcggaggttttaggagtgagtgtagttaccgtatcc
cgtcgtttgaaaaaagggattaacctgctgaaaaacaaaatgtcatag
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integrated database retrieval system
