Halothece sp. PCC 7418: PCC7418_1404
Help
Entry
PCC7418_1404 CDS
T02379
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hao
Halothece sp. PCC 7418
Pathway
hao03030
DNA replication
hao03430
Mismatch repair
hao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PCC7418_1404
03430 Mismatch repair
PCC7418_1404
03440 Homologous recombination
PCC7418_1404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hao03032
]
PCC7418_1404
03400 DNA repair and recombination proteins [BR:
hao03400
]
PCC7418_1404
Enzymes [BR:
hao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PCC7418_1404
DNA replication proteins [BR:
hao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PCC7418_1404
DNA repair and recombination proteins [BR:
hao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PCC7418_1404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
SpoOE-like
Motif
Other DBs
NCBI-ProteinID:
AFZ43599
UniProt:
K9Y9Q9
LinkDB
All DBs
Position
1527572..1530256
Genome browser
AA seq
894 aa
AA seq
DB search
MHQKKGNMSSFVGLHIHSDYSLLDGASQLPPLVDRALELGMSAIALTDHGVMYGAIELIK
ICRSKNIKPIIGNEMYVINTDDLEKPAKYKKYHQVVLAKDTQGYKNLVKLTTVSNLKGIH
GKGIFARPCISKYYLEQYKEGLIVTSGCLGGEVPQAILRGDRKEARRVAKWYKKVFGDDY
YLEIQDHGSPEDRIVNTEIVKISQELDIKIVATNDSHFISCNDVEAHDALICIQTNKLIT
EDKRLRYSGTEYLKSADEMRQLFRDHLSDDVIESAIANTVEVAEKVKPYNILGEPRIPDY
PVPSGHNADTYLEELTWNGLMERLGCRSRSEISETYKTRLERELTIMQERGFSTYFLVVW
DYIKYARDHNIPVGPGRGSAAGSLVAYALKITNIDPVHHGLLFERFLNPERKSMPDIDTD
FCIERRDEVIEYVTRRYGDDKVAQIITFNRMTSKAVLKDVARVLDIPYSESDRLAKMIPV
ARGKPAELTKMISDDTPEPEFKKLYDSDEKVRRWVDMAIRIEGTNKTFGVHAAGVVISKE
PLDEVVPLQKNNDGAVITQYYMEDLEALGLLKMDFLGLKNLTTIQRTADLIEKNKGTKLD
LDELPLDEIHSRKILAKGEIKNTKPPDIQKTYNLIEKGWLEGVFQLESSGMLKVVQDLKP
SSIEDLSSILALYRPGPLDAGLIPKFIDRKHGREEIIYEHPILEPILDETYAVMVYQEQI
MKIAQDMAGYSLGQADLLRRAMGKKKVKEMQKHREIFIDGATKNGVKQETAEHLFDQMIK
FAEYCLSYDTEIWTVEYGAMPIGKIVEEKIECSVYTVDENGFVYTQPIAQWHPRGQQEII
EYTLEDGRKIRATKDHKMMTESGEMLPIEEIFQRELDLKVETFHEMSLLRRGAK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcagaaaaagggaaatatgtcgtcattcgttggtttgcacattcatagcgattac
agtttgttagatggggcatctcagttgcctcctttggttgaccgtgctttagaattgggg
atgagcgcgatcgcgctgacggatcacggggtgatgtatggcgcgatcgagttaatcaaa
atttgtcgctccaaaaatattaaaccgatcatcgggaatgaaatgtatgtgattaatacc
gatgatttagaaaagcctgccaaatataaaaaatatcaccaagttgttctcgccaaggat
actcaaggctataaaaatttagttaaattaaccactgtttctaatttaaaagggattcac
gggaaaggaatttttgctcgtccttgtattagtaaatattatctcgaacagtacaaagaa
ggattaattgttaccagtggttgtttagggggagaagttccccaagcgatcttaagagga
gaccgcaaagaagctcgtcgcgttgcaaaatggtataaaaaagtttttggagatgactat
tatttagaaattcaagatcacggctcacctgaagatcgcattgttaacacagaaatagta
aaaattagtcaagaattagatattaaaattgtcgccacgaatgattcccattttatttct
tgtaatgatgtggaagcccatgacgcactgatttgtattcaaaccaataaattaattact
gaagataaacggttgcggtatagcggtacggaatatctgaaatctgctgatgaaatgcga
cagttattccgtgatcatttatccgatgatgtgattgaaagcgcgatcgcgaatacagta
gaagttgccgaaaaagtgaagccttacaacattttaggagaaccccgcattcccgattat
ccagttccgagtggacataatgccgatacttatctcgaagaattaacttggaatggatta
atggaacgccttggttgtcggagtcgttctgaaattagtgagacgtataaaacccgttta
gaacgcgaattaaccattatgcaggaacgggggttttctacttactttttagtggtttgg
gattatattaaatacgctagagatcataatattccagtaggacctgggcgcggttctgct
gccggttctttagtggcttatgccttaaaaattaccaatattgatcccgttcatcatggc
ttattatttgagcgtttcttaaatccagaacggaagtcaatgcctgatattgataccgac
ttttgtattgaaagaagagatgaggtgattgagtatgttacccgccgttatggagatgat
aaagtcgcgcaaattattacctttaaccgcatgacatcgaaagcagtattaaaagatgtt
gcccgcgttttagatattccttattctgaatcagatcgccttgcaaaaatgattcctgtt
gcgcgaggaaaacctgctgaactaactaaaatgatctccgatgatacccccgaacctgag
tttaagaaactctatgattctgatgagaaagttcggcgttgggtggatatggcaattcgg
attgaagggacgaataaaacctttggcgttcacgctgcgggagtggtaatttctaaagaa
cccttagatgaagttgtccctttacaaaagaataatgatggggcagtaattacacaatat
tatatggaagatttagaagccctgggcttgttaaaaatggactttctcgggcttaaaaat
ctgacaacaattcagcgaacagcagatttaattgagaaaaataaagggacaaagttggat
ttagatgaactgcctctggatgaaattcattcccgaaaaattttagccaaaggagaaatc
aaaaatactaagccccctgatattcaaaagacctataacctcattgaaaaaggttggcta
gaaggggtttttcagcttgaatcatcgggaatgttaaaagtggttcaagacttaaaaccc
tccagtattgaagatctttcttccattttagctctctatcgtcctggccccttagatgcg
ggactaattcctaagtttattgatcgcaaacatggacgagaagaaattatctatgaacat
cctattttagaaccgattttagatgaaacttatgcggtcatggtctatcaagaacagatc
atgaaaattgcccaagatatggcaggttattctctgggtcaggcggacttattgcgtcgt
gcgatggggaaaaagaaagtgaaagaaatgcagaaacatcgcgaaatttttattgatggg
gcgacaaaaaatggcgtgaaacaagagactgctgaacacttatttgatcagatgattaaa
tttgctgagtattgccttagctatgatacggaaatttggacagtggaatatggggcgatg
cctattggcaaaattgtagaagaaaaaattgaatgtagcgtttatactgttgatgaaaat
ggctttgtttacacccaaccgatcgcgcaatggcatcctcgtggtcaacaagaaattatt
gaatataccttagaagatggcagaaaaattcgcgcgacaaaagaccataaaatgatgaca
gaatcaggggaaatgttgcctattgaagaaatctttcagcgagaattagatttaaaagta
gagacgttccatgaaatgtccttgttacgaaggggggcgaagtag
DBGET
integrated database retrieval system
