Halothece sp. PCC 7418: PCC7418_2512
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Entry
PCC7418_2512 CDS
T02379
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hao
Halothece sp. PCC 7418
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hao03400
]
PCC7418_2512
DNA repair and recombination proteins [BR:
hao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC7418_2512
Archaeal homologous recombinant proteins
PCC7418_2512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
HIP1_clath_bdg
ABC_tran
Occludin_ELL
DUF3450
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFZ44659
UniProt:
K9YCR6
LinkDB
All DBs
Position
complement(2746933..2749950)
Genome browser
AA seq
1005 aa
AA seq
DB search
MIPQQLILSNFLSYQQATLDFTGLHTACICGANGAGKSSLLEAITWALWGKTRTTSDEDV
INSTAKEVQVDFRFQCNGDTYRVLRGRRRGQSASLELQVQHQNQFQSLTAKGVKATQKKI
NELLKLDYDTFINSAYLRQGRADEFMQRSPTERKKLLAELLKLDQYQDLSEEAKDISRKL
KGQSEQLEQTLAPTEKELEQKTTIAQSLAEVEAKYQALQEKQEADQTELQRLQTLDSQRK
TKQEQIDWYNQQYQTIAQDYQKLTQEQQKIQQSLSELNQLLERETEIKQAYQTYLDLQKE
QESLAKKFETYQDLTQRSQQIKEQQQKQINDFKLQKQRIETELENLTAQEESAQKTLQKA
DEIKEEVAKLNAARERLKELDQLQQEVSPLMQRRQTLQLEVDREGERKKARLEQIESNLK
ELQAELAQFPEREKEYNSIIDRLKELEKKETYSQRLQEKRQKQQELQARLQQTEKTYEKQ
LEDLVKKLELLQNPEANCPLCERPLDDEHKQRVTHKTQQEYQSIEAEKATVWEDLAKSKR
ELDHYSQEYETLTQELAEHDELVARRGQLESYFDEDVCNIHEKISNLNREKRDIQEILDQ
ETYAQEKQAELQNIEQRLAEINYDEKTHAIAREKVDSLRYADRKAEQLADAKKEVEKINQ
RKPELEQSRTKIQEQITEMETSFSEQLQTIDQEIEDLGYARSRHNEVITQVQEAQKSQLN
YQKLEQAKAEFPQKQAELTEINQRLQSREKEKADCQQQLDALNEEIKKVTDVRTEIKQLE
QKTQQQRQQLDSYLSEKGKLEQRLNYLEELKTKYQDSKEKLKTLKRKETVYKELSQAFGK
NGIQALMIENILPQLEATTNQILSRLTGNQLHVQFLTQKASKGRSKKQTKLIDTLDIIIA
DAQGTRAYETYSGGEGFRINFAIRLALAKLLAQRAGTALQLLIVDEGFGTQDSHGCERLI
AAINAIAPDFCCILAVTHMREFKEAFQHRIEVTKTDQGSQITVSS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaacaactgatactctctaactttctcagttatcaacaagcgacgctagac
tttacaggattgcataccgcttgtatttgtggggcgaatggtgcaggaaaatcttccctt
ctcgaagccattacttgggcgttatggggaaaaacgcgcactacttcggatgaagatgtg
attaattctactgcaaaagaagtacaagtggattttcgctttcaatgtaatggggacacc
tatcgggttttacgaggtcgtcgtcgcggacaaagcgcatctttagaattacaagttcaa
catcaaaatcagtttcaatcgttaactgcaaaaggagtgaaagcaacacaaaaaaagatt
aatgagttgctaaaactcgactacgatacgtttattaattctgcttatttacgtcaaggt
cgcgcggatgaatttatgcagcgttccccgacagaacgcaagaaactgttagcggaatta
ctcaaactcgatcagtatcaagatttatcggaagaagccaaagatatttctcggaaatta
aaaggacaaagtgaacagttagaacaaacgctagccccaacggaaaaagagttagaacaa
aaaacaacgatcgcgcaatcattagcagaagttgaagcgaagtatcaagcattacaagaa
aaacaagaagccgatcaaacagaattacaaagactacaaaccttagattctcagcgcaaa
actaaacaggaacaaattgattggtataaccaacaatatcaaacgatcgcgcaagattat
caaaaactaacccaagaacagcaaaaaattcagcaaagtctctcagaactcaatcaactg
ttagaacgagaaacagaaattaagcaagcctatcaaacctatctcgatttacaaaaagaa
caagaaagtcttgctaagaagtttgaaacctatcaagacttaacgcagcgatcgcagcaa
attaaagaacagcagcaaaagcaaatcaatgatttcaaactccaaaaacagcgcatcgaa
accgaactggaaaacttaactgcacaagaagaatcggcacaaaaaacactccaaaaagcc
gatgaaattaaggaagaagttgcgaaactgaatgcagcccgagaacgcttaaaagaactg
gatcaactgcaacaagaagtgtcacccttgatgcagcgtcgccaaacgttgcaattggaa
gttgatcgggaaggagaacgcaaaaaagcccgtctagaacaaatcgaaagtaacttaaaa
gaattacaagccgagttagcgcaatttccagaacgagaaaaagaatataattcaattatt
gaccgattaaaagaactggagaaaaaagaaacctattcgcaacgactacaagaaaagcga
caaaagcaacaagaattacaagcgagactccaacaaacggaaaaaacttatgagaaacaa
ttagaagacttagttaaaaaattagagttattacaaaatccagaagcgaattgtccgtta
tgtgaacgccctctggatgacgaacataaacaacgagtgactcataaaacccaacaagaa
tatcaatccattgaagccgaaaaagcaacagtttgggaagatttagcaaagtcaaaacgt
gaattagatcattacagtcaagaatatgaaaccttgactcaagaattagcggaacatgat
gaattagtcgcccgtcggggacagttagagtcttactttgatgaggatgtttgtaatatc
catgagaaaatttctaatttaaatcgcgagaaacgagacattcaagagatattagatcag
gaaacgtatgctcaagaaaagcaagcagaattgcaaaatattgaacagcgattagcagag
ataaattatgatgagaaaacccacgcgatcgcgcgagaaaaagtggatagtttacgctac
gcagaccgcaaagcagaacaactcgcagatgcaaaaaaagaagttgaaaaaattaatcag
cgtaagcccgagttagaacaatcgcggactaaaattcaagaacaaattacagaaatggaa
acaagttttagtgaacaattacaaacaattgatcaagaaattgaagacttaggctatgcg
cgatcgcgccacaatgaagttattactcaagtccaagaggcgcaaaaaagtcaactcaac
tatcagaaactcgaacaagcgaaagcagagtttccccaaaagcaagccgaattaaccgaa
attaatcaacgccttcaaagtcgggaaaaagaaaaagcagactgtcagcaacaactcgac
gcgctgaatgaagagattaaaaaagtgactgatgttcgcaccgaaattaaacagctagaa
cagaaaacgcagcaacaacgtcaacaactagacagttacttatcagagaaaggaaaactc
gaacaacgactgaactatctcgaagaattaaaaacaaaataccaagactcgaaagaaaaa
ctgaaaactttaaaacgaaaagaaaccgtttataaagaactctcccaagccttcgggaaa
aatggcattcaagccctcatgatcgaaaatatcttaccgcaactcgaagcaacaactaat
caaatcttaagccgtttaacagggaatcaattgcacgttcaattcctcactcaaaaagca
agtaaaggacgatccaaaaagcaaaccaagctcattgatacccttgatattattattgca
gatgcccaaggaacaagggcttatgaaacctattcgggtggggaagggtttcggattaat
tttgcgattcgtctcgccctagccaaactgttagcacaacgagcaggaaccgctttacaa
ttactcattgtggatgaaggctttggaacgcaggatagtcacggttgtgaacgcttaatt
gcagccatcaacgcgatcgcgcccgatttttgttgtattctggctgttacccatatgcgg
gaattcaaagaagccttccagcatcgcattgaagtcacgaaaacggatcaaggctcacaa
attaccgtttcttcataa
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