Halothece sp. PCC 7418: PCC7418_3512
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Entry
PCC7418_3512 CDS
T02379
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hao
Halothece sp. PCC 7418
Brite
KEGG Orthology (KO) [BR:
hao00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PCC7418_3512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hao03019
]
PCC7418_3512
03009 Ribosome biogenesis [BR:
hao03009
]
PCC7418_3512
03036 Chromosome and associated proteins [BR:
hao03036
]
PCC7418_3512
Enzymes [BR:
hao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PCC7418_3512
Messenger RNA biogenesis [BR:
hao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCC7418_3512
Ribosome biogenesis [BR:
hao03009
]
Eukaryotic type
90S particles
RNase
PCC7418_3512
Prokaryotic type
rRNA processing factors
PCC7418_3512
Chromosome and associated proteins [BR:
hao03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PCC7418_3512
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_CARF
Motif
Other DBs
NCBI-ProteinID:
AFZ45623
LinkDB
All DBs
Position
3802544..3803332
Genome browser
AA seq
262 aa
AA seq
DB search
MRANRSSELATDGRHSKTESKAPRSGNRQGRSRRGRELEKLVERLGLADTTPVDWKLLDL
ALTHPSASSVANYQQLEFVGDAVVRLAASELLLETYPEAPVGDFAAIRSILVSDRVLAEF
AESYGMDGFLLMAGSAAKNKAGARSRLADTFEAVLGALYLSTHSMKLIRPWLDPILKEKA
DQIRQDPARQNYKDALQEWTQAHYKVLPHYQVEETGHGYDDPERFTAYVWLQERYLGQGK
GRSKKAAQQAAAQSAYQQLTQS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagggcaaatcgctcttctgaattagcaaccgatggtcgtcactcgaaaacagagtca
aaagcaccccgctctggaaatcgacaggggcgatcgcgccgaggtcgggaattagaaaaa
ctggtagaacggttaggattagcagacaccacccccgttgattggaaattattggattta
gccttaactcatcccagtgcgtctagtgtagcgaattatcagcaactagaatttgtgggc
gatgctgttgtccgtctcgcagcatcagagttactcttagaaacctatcccgaagcacca
gtgggggattttgctgcgattcgttcgattttagtcagcgatcgcgtcttagcagaattt
gctgaaagttatggcatggatgggtttttattgatggcaggaagtgcagcgaaaaataaa
gcaggagcgcgatcgcgcttagccgacacctttgaagcagtcttaggtgcgctttatctc
agtacccactccatgaaattaatccgtccttggcttgatcccattctcaaggaaaaagcg
gatcaaattcgccaagatcccgcccgtcaaaactataaagacgcactccaagaatggacg
caagcccattataaagttctccctcactaccaagtcgaagaaactggacatggctatgat
gatcccgaacggttcacggcttatgtctggttacaagagcgttacttgggtcaagggaag
ggacgctcgaaaaaagcagcccaacaagctgcagcccaatctgcttatcaacaattaact
caatcatga
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