Glaesserella parasuis SH0165: HAPS_0020
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Entry
HAPS_0020 CDS
T00825
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03030
DNA replication
hap03430
Mismatch repair
hap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAPS_0020 (dnaX)
03430 Mismatch repair
HAPS_0020 (dnaX)
03440 Homologous recombination
HAPS_0020 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hap03032
]
HAPS_0020 (dnaX)
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_0020 (dnaX)
Enzymes [BR:
hap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAPS_0020 (dnaX)
DNA replication proteins [BR:
hap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAPS_0020 (dnaX)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAPS_0020 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
AAA_16
AAA_18
AAA_2
ResIII
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ACL31725
UniProt:
B8F323
LinkDB
All DBs
Position
26035..28047
Genome browser
AA seq
670 aa
AA seq
DB search
MSYQVLARKWRPQRFSEVVGQQHVLSALENGLREGRLHHAYLFSGTRGVGKTSIARLFAK
GLNCETGISADPCGQCANCKAIEEGRFIDLIEIDAASRTKVEDTRELLDNVQYKPTVGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPITILSRCMQFHLRALEQ
SQIQQHLEFILTQEQIPYELSALAKLAKAAQGSIRDALSLTDQAIAVSNVNITLPIVSQM
LGLIDDHQPLELVQALANADGEKAMAVIQSVAEKGVDWQQLFSDTAETLHQIAMLQLLKH
AHQEETPLHFLAKQISPEDVQFFYQVMLTGKKELPFAPEQRSGVEMTILRALAFHPKNMA
TTTTVATPTTPVAPVQSPNSISQLRERLAQQQNSAQTVTTQAVNTEQHFAKNLSQPTASP
TETNTESISPALKAMQARQQLKAKQEQQDEKKKSDLTPIQPPKTVNKKSVQQGLMNLVTA
QDQRQQIEETPQKNIASQNDEDYRWTWLNPELENQEEAPKPSEIKQAILQERTPELVKKT
IELGCERDKWSRIVNSLKLGGVSRQLALNSYLESHNNNHLLLVLNPTMAHLNSNEATQSL
YNALSQQGFSSEMRIGESDEFQTPLEIRRVIFEQLTQEAKQALQADKKLKLLQQAFDAQM
DEATIRAVAE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagttctagcacgcaaatggcgaccacagcggtttagcgaagtggtcggg
caacaacacgttttatccgctctcgaaaatggtttgcgagaagggcggttacatcacgct
tatcttttttcaggaacgcgtggcgtagggaaaacctcgattgctcgtctatttgcaaaa
ggcttgaactgtgaaacggggatcagtgctgatccttgtggtcaatgtgcgaactgtaaa
gccattgaagaagggcgatttatcgatctgattgaaatcgacgcggcttcacgcacaaaa
gtcgaagatacccgtgaattgctcgacaatgtgcaatacaaaccaaccgtcggacgtttt
aaggtctatttgattgacgaagtgcatatgctttctcgtcacagcttcaatgctttatta
aaaacccttgaagaaccgcctgaatatgtcaaattcttacttgcgaccacggatccgcaa
aaactgccgattaccattctttctcgttgtatgcagttccatttgcgtgcgttggaacaa
tcgcaaattcagcaacaccttgaatttatcttaacccaagagcaaattccctacgaattg
tcagcacttgctaaactagcaaaagcggcacaaggcagtattcgtgatgcgttgagctta
accgatcaggcaattgctgtcagtaatgtgaatatcaccttgccgattgtaagccaaatg
ctcggcttaattgacgatcatcaaccgttagaattggtgcaagcccttgccaatgcggac
ggtgaaaaagcaatggcagtaattcagtctgtggcggaaaaaggtgtcgattggcaacaa
ctgttcagcgatacggcagaaaccttgcaccaaattgcgatgttgcagttgttgaaacac
gctcatcaagaagaaaccccactgcattttttagcgaaacagatctctccagaagatgtg
cagtttttctatcaagtaatgcttacaggcaaaaaagagttgccttttgctcctgagcaa
cgttcaggcgtggaaatgactattttaagagccttggctttccaccctaaaaatatggca
accacgacaacagttgctacgccaacaacgcccgttgcacctgtgcaatcgccaaatagc
attagccagttaagagaacgtttagctcaacagcaaaattcagctcaaactgtgacaaca
caagcggttaatactgaacaacattttgcaaaaaatctctctcaaccaaccgcttcccca
actgaaacgaatacagaaagcatatcgcctgccttaaaagcaatgcaagctcgtcagcaa
ttaaaagcgaaacaagagcaacaagacgaaaaaaaaaagtctgatttaactcccattcaa
ccaccaaaaacggtgaataaaaagagcgttcagcaaggtttaatgaacctagtgaccgct
caagatcaacggcaacaaatagaagaaacacctcaaaaaaatatcgcttcacaaaatgat
gaagactaccgttggacttggcttaatcctgagttagaaaatcaagaggaagccccgaag
ccttcagaaattaagcaagccattttgcaagagcgaacacctgagctagttaaaaaaacg
attgagcttggttgtgaacgagataaatggagccgaattgtaaacagtttaaaactgggc
ggagtttctcgtcagctcgctttaaacagctatttagaaagccataacaacaatcatctt
ttgttggttttaaaccccacaatggcacatttaaacagcaatgaagcgacccaaagttta
tacaatgccctctcacaacaaggctttagtagtgaaatgcgaataggcgaaagtgatgag
ttccaaaccccattagaaattcgtcgagttatttttgaacagctcacgcaagaggctaaa
caagcactacaagcagacaaaaagttaaaacttttacaacaagcctttgatgctcaaatg
gacgaagcaactattcgggcagtggcggagtag
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