Glaesserella parasuis SH0165: HAPS_0180
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Entry
HAPS_0180 CDS
T00825
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03030
DNA replication
hap03410
Base excision repair
hap03420
Nucleotide excision repair
hap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAPS_0180 (polA)
03410 Base excision repair
HAPS_0180 (polA)
03420 Nucleotide excision repair
HAPS_0180 (polA)
03440 Homologous recombination
HAPS_0180 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hap03032
]
HAPS_0180 (polA)
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_0180 (polA)
Enzymes [BR:
hap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAPS_0180 (polA)
DNA replication proteins [BR:
hap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HAPS_0180 (polA)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HAPS_0180 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAPS_0180 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ACL31876
UniProt:
B8F3H4
LinkDB
All DBs
Position
192932..195796
Genome browser
AA seq
954 aa
AA seq
DB search
MATIAQNPLVLVDGSSYLYRAFHAFPPLTNKQGEPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDELFEQYKSHRPPMPDELRSQIQPLHAIIKALGIPLLSIEGVEADDVIGT
LAVQASQAGKHVLISTGDKDMAQLVNDHIMLINTMNNTLLDREGVIEKYGIPPELIIDYL
ALLGDSSDNIPGVKGVGEKTAIALLQGIGSMQAIYANLDKVAELSFRGAKTFAPKLEAEK
ETADLSYLLATIKTDVALDVTYDQLITQPQQRDQLVELFGRYEFKRWLNEVMNDANPVTQ
TSAEKIPNNYQATQAVSSEQKSAPFVKISIDRTAYDCVNSPELFTKWLAKLQMAELVAVD
TETDNLDAMQANLVGISFGLENGEACYIPLAHKGKIAQPTQVDLFGESEAELDEVEALLP
NQLNKADCLAQLKPILENPNIRKIGQNIKYDLTIFARYGIELQGVAFDTMLQSYTLDSTG
RHNMDNLAERYLGHQTIPFEELAGKGKHQLTFDQIELDKATEYAGEDAEITMKLHQLLWS
ELQKTPELVKLFEQIEMPLVSVLSRVERNGVLIDPAKLLAHSVEIEQRLKELETLVHQEA
GEVFNLASTKQLQEILFNKLGLPILKKTPKGAPSTNEEVLEELAQMGHQVPVLLMEHRGL
SKLKSTYTDKLPQMINAQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEQGRRIRQAF
IARDGYVILAADYSQIELRIMAHLANDANMIKAFAEGKDIHRSTAAEIFGVPLEAVTSEQ
RRSAKAINFGLIYGMSEFGLANQLGISRTDAKKYMELYFQRYPAVQQFMLDIREKAAEKG
YVETLFGRRLYLPEINSSNQMRRKAAERVAINAPMQGTAADIIKVAMIGIDQAVRNCEDI
AMIMQVHDELVFEVKADRVEHYTQLIKAEMEKAIELKVPLIAEVGVGSNWDEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatcgcacaaaatccgctcgttttagtggacggttcgtcctatttatatcgt
gcattccacgcatttccccctttaactaacaaacaaggtgagccaacaggggcgatgtat
ggggtgctgaatatgttaaaaagcctgattgcacaggttgagccaagccatattgccgtc
gtgtttgatgcgaaagggaaaaccttccgtgatgagctgtttgaacagtataagtctcac
cgtccgccgatgcccgatgagcttcgttcgcagatccaaccgttacacgcaataattaag
gcattgggtattccgctgttgtcgattgaaggggtggaagctgatgatgtgattggcacg
cttgcggtgcaggcttcacaagcaggtaagcacgttttaatcagtacgggcgataaagat
atggctcaactggtgaacgatcatattatgctgattaatacgatgaacaatacgctgtta
gatcgtgaaggcgtgattgaaaaatatggtattccgcctgagttgattatcgactattta
gccttattgggcgactcgtccgataatatccccggggtaaaaggtgtgggtgagaaaacg
gcgattgcgttgttgcaaggtattggctcaatgcaagcgatttatgcgaatttagacaaa
gttgcagagttatcatttcgtggggcaaaaacctttgcaccgaaactggaagcagaaaaa
gaaacagccgatctctcttatctattagcgacaatcaaaaccgatgttgcccttgatgtc
acttacgatcagcttattactcaaccccaacagcgagatcaactggtagaactctttggt
cgttatgaatttaaacgctggctgaacgaagtgatgaatgatgctaacccagtgacacaa
acatcggcagagaaaatcccgaacaattatcaagccacacaagcggtcagttcagaacaa
aaatctgcaccttttgtaaaaatttcgatagatcgcaccgcttacgattgcgtgaacagc
cctgagctgtttaccaaatggctggcaaaattgcaaatggcagagcttgtggcggtggat
accgaaacggataatttagatgcaatgcaagcaaatttagtcgggatttcatttggcttg
gaaaatggcgaagcgtgctacattccgttggcgcataaaggcaaaattgcacagccgacc
caagtggatctgtttggtgaaagtgaagcagaactcgatgaagtcgaagcgttactgcct
aaccagttgaacaaggcggactgtttggcacagttaaaaccgattttagagaacccaaat
atccgcaaaatcgggcagaatatcaaatacgatttaacgatttttgcacgctacggcatt
gagctacaaggggttgcctttgatacgatgttgcaatcttacaccctagacagcaccggt
cgtcacaatatggacaatttggcagagcgttatttgggacatcaaactattccttttgaa
gagttggcaggtaagggcaaacatcagcttaccttcgatcaaattgaactggataaagca
acagaatatgcaggggaagatgccgaaattacaatgaaattacatcaactcttatggtct
gaactacaaaaaacgcctgaattggtgaaactgtttgagcaaatcgaaatgccgttggtg
agcgtactttcccgtgtggaacgaaacggcgtattaatcgatcctgccaaactgttggca
cattcagttgagatcgaacagcgtttaaaagagcttgaaacccttgtacatcaagaagca
ggagaagtgtttaaccttgcttccactaagcaactgcaagagattttatttaacaaactc
ggcttaccgattttaaagaaaaccccgaaaggtgcgccatcaaccaacgaagaagtgttg
gaagaattggctcaaatgggacaccaagtgcctgtgctgttgatggaacatcgtggcttg
agcaagctgaaatcgacctataccgataaactaccgcagatgattaatgcacaaacagga
cgtgtgcatacttcatatcatcaagcggtcacggcaacagggcgactttcatcaagcgat
ccgaatttacaaaatattccgatccgcaacgagcagggcagacgtatccgtcaagccttt
attgcccgtgatggctatgtgattttggcggcggactattcgcaaattgagttacgcata
atggcacatcttgctaatgatgcaaatatgatcaaagcctttgccgaaggtaaagacatt
caccgttctacggcggcggaaatttttggcgtgccgttggaagcggtgaccagtgaacaa
cgccgtagtgccaaggcgattaacttcggcttgatttacggaatgtctgaatttggcttg
gcaaatcaactgggcatttctcgtaccgatgcgaaaaaatatatggaactttacttccag
cgttatcctgcggtgcaacagtttatgttagacattcgtgaaaaagccgctgaaaaaggc
tatgtcgaaaccctatttggtcgccgtttatatttgcctgaaattaactcaagcaaccaa
atgcgacgcaaagcggcagaacgtgttgccatcaacgccccaatgcaaggcacggcggca
gatattatcaaagtggcaatgatcgggatcgatcaagcggtgcgaaactgcgaagatatt
gcaatgattatgcaagtacacgatgaattagtctttgaagttaaagccgacagagtagag
cattacacccaactgattaaagccgaaatggaaaaagcaattgagcttaaagtaccattg
attgcggaagttggagttggaagcaattgggatgaggcacattga
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