Glaesserella parasuis SH0165: HAPS_0217
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Entry
HAPS_0217 CDS
T00825
Symbol
lcfA
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap00061
Fatty acid biosynthesis
hap00071
Fatty acid degradation
hap01100
Metabolic pathways
hap01212
Fatty acid metabolism
hap02024
Quorum sensing
hap04146
Peroxisome
Module
hap_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HAPS_0217 (lcfA)
00071 Fatty acid degradation
HAPS_0217 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HAPS_0217 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HAPS_0217 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
hap01004
]
HAPS_0217 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hap04147
]
HAPS_0217 (lcfA)
Enzymes [BR:
hap01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HAPS_0217 (lcfA)
Lipid biosynthesis proteins [BR:
hap01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HAPS_0217 (lcfA)
Exosome [BR:
hap04147
]
Exosomal proteins
Exosomal proteins of breast milk
HAPS_0217 (lcfA)
Exosomal proteins of breast cancer cells
HAPS_0217 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACL31909
UniProt:
B8F3K7
LinkDB
All DBs
Position
239633..241333
Genome browser
AA seq
566 aa
AA seq
DB search
MEKIWFDNYPAEAERTLDVEPYESLVEMFEKAVQRHPDIPAYINMGQVLTFRKLEERSRA
FAAYLQNELRLEKGERIALMIPNLLQYPIALFGALRAGLVVVNVNPLYTPRELEYQLNDS
GAKAIVVVSNFAATLEKVVFNTQVKHVILTRMGDQLSFGKRTLVNFVVKYVKKLVPKYKL
PHAVSFRETLSIGKQRQYVRPTLYKNDLAFLQYTGGTTGVAKGAMLSHSNVIANILQAKW
VAYPLIQRSQERIGVIALPLYHVFALTVNCLLFIELGVTGLLITNPRDIPAFVKELKKYP
VMAITGVNTLFNALLNNPQLKEVDFSNLKLSVGGGAAIQRAVADRWHKTTGCHIIEGYGM
TECSPLIAATRNDSTEYSGSIGVPVPNTDIRIVDDAGNDLPIGERGELWVKGPQVMQGYW
QRPEDTAEVLKDGWMATGDIVELGQDLNLRIVDRKKDMIIVSGFNVYPNEIEDVVALHPK
VNEVVVVGIPSEVSGESIKVFVTKKDESLTREELRNHCRQHLTGYKIPREIEFRDELPKS
NVGKILRRVLRDEEVARVKSQMEGKL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatttggtttgataattatccagcagaggctgaacgtaccttagatgtggag
ccttacgagtcgttggtggagatgtttgaaaaggcggtacaacgccaccctgatattcct
gcttatattaatatgggtcaggtacttacatttcgtaaattggaagagcgtagccgtgct
tttgctgcatatttgcaaaatgaattacgccttgagaaaggtgaacgcattgcgttgatg
ataccgaatttgttgcaatatccgattgcgttgtttggtgcgttgcgtgcagggttagtg
gtggtgaatgtcaatccgctttatacaccgcgtgaattagagtatcaattgaatgatagt
ggagctaaagcgattgtcgtcgtgtcaaattttgcggcaaccttggaaaaagtggtgttc
aatacgcaggtgaagcacgttattttgacccgtatgggcgatcaactctcttttggtaag
cgtacgctagtcaactttgttgtgaagtatgtgaaaaaattggtgcctaaatataaattg
ccacatgcggtcagtttccgtgagacattaagtatcgggaaacagcgtcaatatgtaaga
ccaacgctctataaaaatgatctggcgtttcttcaatatacaggcgggacaacaggagtg
gctaaaggggcaatgctaagtcatagcaatgtgattgccaatattcttcaagcgaaatgg
gtagcctatcctttaatccaacgaagccaagagcgaattggggtaattgctctgccgctc
tatcacgtttttgctttgacagtgaattgtttattatttatcgaactaggtgtaacgggg
ttgttaattactaaccctcgtgatattccagcttttgtgaaagagttgaagaagtatcct
gtgatggcgattacaggggtaaatactttgtttaatgcgttactgaataatcctcaactg
aaagaagttgatttttctaacttgaagctctctgtaggcggtggtgcagcaattcagcgt
gcggtggcggatcgttggcataagacaacggggtgccatattattgaaggttatggtatg
accgaatgttccccattgattgcggcaacacgtaacgattctacggagtattcgggatct
attggtgtgccagtaccaaataccgacattcgtattgttgatgatgctggtaatgattta
ccgataggtgagcgtggcgagttatgggtaaaaggtcctcaagtaatgcaaggttattgg
caacgccctgaagataccgcagaagtgctaaaagatggctggatggcaacaggtgatatt
gttgagctgggacaagacctcaatttacgcattgttgatcgtaaaaaagatatgattatt
gtatctggttttaatgtgtatcctaatgagatcgaagatgtcgtagcattacatccgaaa
gtgaatgaagtggttgtggttggtattccaagtgaagtatcgggtgaaagtattaaggtc
tttgtgactaaaaaagatgaaagcctaactcgtgaggaactgcgtaatcactgtcgccaa
catttaacaggctataaaattcctcgagagattgaattccgtgatgagctaccgaaaagc
aatgtaggtaagattttacgccgtgtgttgcgagatgaggaagttgctcgagtgaaatca
cagatggaaggaaaattgtag
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