KEGG   Glaesserella parasuis SH0165: HAPS_0350
Entry
HAPS_0350         CDS       T00825                                 
Symbol
hsdR
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hap  Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:hap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hap02048]
    HAPS_0350 (hsdR)
Enzymes [BR:hap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HAPS_0350 (hsdR)
Prokaryotic defense system [BR:hap02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HAPS_0350 (hsdR)
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD NCH2
Other DBs
NCBI-ProteinID: ACL32034
UniProt: B8F3Y2
LinkDB
Position
379862..383026
AA seq 1054 aa
MLINENTIEQACLRFLQELGWDYTHGSTINADGENPWRLRTDEVVFRAVLREAVERLNPQ
LPSATVDEVVALVCKTDITDLTERNQQAYRYLREGVRVEYRENDEQKVEFARLIDFQQPS
LNRFDVVNQLTILGRKGNRRPDVICYINGLPVVVLELKNPLKENADLPQAFNQLQTYKQE
IGDLFVYNQALVISDGILAKVGSLTADLERFTPWRVVDEKNKQRISFEHELEGLVRGLLN
PASLLDYIQNFIVFEQTSSGRLVKKIAAYHQFYGVNEAVDCTLWAASDQGNGKIGVMWHT
QGSGKSLSMLFYAGKLLSQAELRNPTIVVVTDRNDLDGQLYATFSGGQALIRQQPVQADG
REALREELAKRETGGVIFTTIQKFGLQEGEQAHPVLNERHNIIVISDEAHRSQYGFSQSM
KLNEANRTGTYRVGYAKHLRDALPNASFIGFTGTPISLEDKDTQEVFGKYVSIYDITDAV
EDGATVPIIYEARQIPIAQSAEFENVVREAQTLLDEDDESSYNFRLREKLMGTDGRLSRL
AEDFVKHFEQRTALIDGKAMVVAMSRQICVKLYEKITALRPEWHSDDVNEGAIKIVMTGS
ASDPEEIQKHIYSSQDKKLLERRFKDPDDPLKVVIVRDMWLTGFDAPCCNTMYIDKPMKG
HNLMQAIARVNRVFRNKSRDNGGLIVDYVGLTSELREATEQYTRSHGKGQMTHNIAEIKV
KMLEYIDVVRGQFATPVNGQSFKLFDALKIEDELALFQQVMLGANYILALDHQMVADKTE
KTPRRNAFLKAVRLAKKGFSLCGADGDVQQYQKELAFYDAVRAILAKREPNSTASNEERQ
LQLVALLNKAVDASGAINLFDLLNREQPNINILSDEFLEKIKNSQTKELWLLAVERYLRS
QINEKGAGNLAVQKDFAERLKQALNQYHNQNLTIMQVLEELLNMSKEFTERLQRGEKLGL
SPAEIAFYDALARNESAVRELGDDALKNLAKAITDKLRKSATIDWQYKEAVRAKMRNLVR
VTLRLFKYPPDKCDEAIQFVLEQAEVIADELTTV
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgctcatcaacgaaaacaccattgaacaagcctgtttgcgatttttgcaggaattgggt
tgggattatacgcacggttcgaccatcaatgccgatggggaaaatccttggcggttgcgg
acggacgaggtggtgtttcgggcggtgttgcgtgaggcggtggagcggttaaatccgcag
ttgccgtctgctacggtggacgaagtggtggcgttggtgtgcaaaacggatattacagat
ttaacggagcgtaatcagcaagcctatcgctacttgcgtgagggcgttcgggtggaatat
cgggaaaatgatgagcaaaaggtggagtttgcccgtttaattgattttcaacagccaagc
ctgaaccgttttgatgtggtgaaccagctgacgattttggggcggaagggcaatcgccgt
cctgatgtgatttgttatatcaatggcttgcctgtggtggtgttggagttgaaaaatcct
ttgaaagagaatgcggatttgccacaggcgtttaatcagttgcagacgtataagcaggaa
atcggcgatctgtttgtgtataaccaagcccttgtgattagcgatggcattttggcaaaa
gtcggttcgctgacggcggatttggagcggtttaccccttggcgtgtggtggacgagaag
aacaagcaacgtatttcgtttgaacacgagttggaaggcttggtgcgtggtttgcttaac
cctgcgagtttgttggattatatccagaattttattgtgtttgagcaaacctcaagcggt
cgtttggtgaagaaaattgcggcttatcatcaattctacggcgtgaatgaagcggtggat
tgtacgctgtgggcggcgagcgatcagggcaatggcaaaatcggggtgatgtggcataca
caaggttcgggcaagtcgttgtcgatgttgttttatgcgggcaaattgttgtcgcaagcg
gaattacgcaacccgactattgtggtggttaccgaccgcaatgatttagacggtcagctt
tatgccactttttcaggcggtcaggcgttaattcgtcagcaacctgtgcaagcagacggc
agggaggcgttgcgtgaagaacttgccaagcgagaaacaggcggtgtgatttttaccacc
attcagaaattcggtttacaagagggcgagcaggcacaccctgtgctaaacgagcgacac
aatattattgtgattagtgatgaagcacaccgttcgcaatatgggtttagccaaagtatg
aagctcaacgaagcaaaccgcacggggacatatcgggtgggctatgcgaagcatttgcgt
gatgccttgccgaatgcctcttttattggttttactggtacgccgattagccttgaagat
aaagatacgcaggaagtgttcggtaaatatgtgtcgatttacgatattaccgatgcggtg
gaagatggggcgactgtgccgattatctatgaagcacggcaaattcccattgcacagagt
gccgagtttgagaatgtggtgcgtgaagcccaaaccttgcttgatgaagatgatgaaagt
agctacaacttccgtttgcgtgaaaaattgatgggaacagacgggcgtttgagccgttta
gccgaagattttgtaaaacattttgaacaacgcaccgctttaattgacggcaaggcaatg
gtggtggcgatgagccgtcagatttgtgtgaaattgtatgaaaaaatcaccgcacttcgt
ccagagtggcatagcgatgatgtgaatgaaggggcgattaaaattgtgatgacgggctcg
gcgagcgatcctgaggaaattcaaaaacacatttattcttcgcaagataaaaagctgttg
gaacgccgctttaaagatccggacgatccgctaaaagtggtgattgtgcgtgatatgtgg
ctaacaggttttgatgccccttgttgcaatacgatgtatattgataagccgatgaaaggg
cataatttaatgcaggcgattgcaagggtaaaccgtgtgtttcgcaataaaagccgtgat
aatggcggtttgattgtggattatgtggggctaaccagcgaacttcgggaagccaccgag
caatacactcgctcgcacggcaaagggcagatgacccacaatatcgccgaaattaaggtg
aagatgttggaatacattgatgttgtgcgtgggcagtttgccacaccggtgaatggtcag
tcgtttaagctgtttgatgccttgaaaatcgaagatgaactggcgttgttccagcaagtg
atgttgggggcgaactatattttagccttagatcatcaaatggttgcggataaaacggag
aaaaccccaagacgcaatgcgtttttaaaagcggtgcgtttggcgaaaaaagggtttagc
ttatgtggtgcagacggcgatgttcagcaatatcaaaaagagcttgccttttatgatgcg
gtgcgtgcgattttggcaaaacgtgagccaaattcaaccgcttcaaacgaagaacgccag
ttgcagttggtggcattattgaataaggcggtggacgcaagcggtgcgattaacctgttt
gatttgcttaaccgagaacagccgaacatcaatattttgtcggacgaatttttagagaaa
atcaaaaacagccaaaccaaagaactttggttgttggcagtggaacgttatttgcgtagc
caaatcaatgagaaaggggcgggcaatttggcggtgcaaaaagattttgccgagcgtttg
aaacaggcgttaaatcaataccacaaccaaaatctcaccattatgcaagtgttggaagag
ttgctgaatatgagcaaggaatttaccgaacgcttgcaacgtggggaaaaattgggttta
tcacctgcggaaatcgccttttacgatgcccttgctcgcaatgaaagtgcggtgcgagaa
ttgggcgatgatgccttgaaaaatttggcaaaagcgattaccgataaattacgcaaatcc
gccaccattgactggcaatacaaagaagccgtgcgagccaaaatgcgaaacttggtgcgt
gtaacgttgagattattcaaatatccaccggataaatgcgatgaggcaatccaatttgtg
ttggaacaagcggaagtgattgcggatgaattgacgacggtataa

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