Glaesserella parasuis SH0165: HAPS_0368
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Entry
HAPS_0368 CDS
T00825
Symbol
vtaA3
Name
(GenBank) virulence-associated trimeric autotransporter
KO
K21449
trimeric autotransporter adhesin
Organism
hap
Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hap02000
]
HAPS_0368 (vtaA3)
Transporters [BR:
hap02000
]
Other transporters
Pores ion channels [TC:
1
]
HAPS_0368 (vtaA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
Collagen
YadA_stalk
YadA_anchor
ESPR
RHH_1
Nudix_N
Motif
Other DBs
NCBI-ProteinID:
ADZ54064
UniProt:
F2GDD9
LinkDB
All DBs
Position
403852..407841
Genome browser
AA seq
1329 aa
AA seq
DB search
MNKIFRVIWNHAQQAWVVVSELIKSHTKTSTYTDKRAQVCTSHYFLDKQQDKFKLSLLSL
VLLGIFFSPVGLAATASTSNEKPYFQDGASASTSGSDNGTIGIGKESKAAHGAIAIGQYS
KAEARHNIAIGYETQAGNHKDHSNSVAVGNNIKIDGKEAVAIGSASKAGKGSVVLGRQAS
AANIEQAVVIGHSATASKAKSIVIGANAKADGYGSISIGGDDLKTTKYQPDDTTQGQGQI
QSQDQSQTTKITTAKGGASIAIGGGSLAKGEGSIVLGPLASASKDEGIAIGANSKSTDEY
GIAVGGSATANGKYAVALGWGSKGVGTDSIAIGKSATTAGASSVVVGAHIDVTGQNLVAV
GSLASAESHATALGYMASAGGRSSVAVGDNAKTNGSAARATAIGHNTVVTVGGGVALGYG
SNANTAGGVEGLKQTHSVTTETSTEANGFKSTQKVDGNNIGAVSVGLAGNKLIKRQITNV
AAGKELTDAVNVAQLKSLTMQIGGDNGSGKVGIWSGTLTVKGQNGITSDVNGSTITVKLD
KDLKDKIDKIAAMGKLIQSTEKESNGNLKITYTDGSHSIIQKGEKGDRGEKGDRGETGPA
GPAGPMGPRGERGEAGPAGAAGPAGARGEAGPVGPEGPRGPAGPTGAQGPAGPRGEQGLK
GDTGPAGEPGKQGPRGEKGEIGPAGPKGEAGAKGDKGDTGEAGPIGPQGPAGAAGPKGEQ
GPKGEQGIQGPKGDKGDTGQKGETGPAGPVGPAGPQGVPGPAGPKGEAGPKGEAGPVGPQ
GPAGPAGPQGPQGPAGPQGPTGPTGPAGPKGENVGRGLGLKDDAESNKTALTPTDAQKAI
AGDNKDGKGGLLAQTGDALNNVATVKDLQAIAQAGLALTGNNADTTVHRPLGTKLTVEGE
GKWNGKDSAANNLYVEAQEADNKLVVKMNRDLTNLNSVTLDTATMTGDKNTINLTGAGEK
VEEEFVKWDPVTKQPILDENGNLQKYKEKVDPRVKLSGIADGDISPNSTDAVNGRQVYVL
TNRIRFFHTNDGHNAEEQINHKSNTVDSRATGSYSTAVGYKAHAKGESSVALGNGATAGE
QGVAIGHGAVASGKQSISIGTGNVVSGNNSGAIGDPNTIKADRSYALGNNNQVNAGQSDV
FVVGNNVKNTTSNSVFLGTNSGYVAAGATTAGAGALESQVTGGVYNAYAGGKATEVKGVV
SVGNVNSDGTMETRRIQNVAPGLISEQSTDAINGSQLYNVAHRLGAKLEREGRQLRAGIA
ATTAMSNIPQVTLPGKSTLGAGIGTFEGQNAVAVGFSRMSDNGRVILKVSAGATSQGKYN
AGAGIALQW
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatatttagagttatttggaatcatgctcaacaggcttgggttgttgtatct
gaattaataaagtcccataccaaaacatccacttacacggataaaagagctcaggtatgt
acctcacattattttttagataaacagcaagataaatttaaattaagtcttttaagtcta
gtattactaggtatattttttagtccagtaggtttagcagcaactgctagcacaagtaac
gaaaaaccatattttcaagatggtgctagtgcatcgacttcaggatctgacaacggtact
attggtattggtaaagagagtaaggctgcgcatggtgctattgctatcggtcagtattca
aaagctgaagctaggcataatattgcgataggttatgaaacacaagcaggaaaccacaaa
gaccactcaaactctgttgcggtaggcaacaatattaaaatagatgggaaggaagcagtt
gctatcgggagtgcttcaaaagcgggaaagggatctgttgtcttaggcagacaagccagt
gcggcaaatattgaacaagcagttgtaataggtcactctgctactgcaagtaaggcaaaa
tctattgttatcggggcaaatgccaaagcggatgggtatggctccatatcaatcggtgga
gatgatttaaaaacaacgaaatatcaacctgatgatacaacccaaggccaaggccaaatc
caatcccaagaccaatcccaaacaacaaaaataacaactgcgaaaggtggagcctctatt
gctattgggggtggttctttggctaagggcgaaggatctattgttttaggtcctttagca
tctgcaagtaaagatgaaggcattgctatcggtgcgaatagtaagtctaccgatgagtac
ggtattgcggttggtggtagtgcaactgctaatggaaaatacgccgttgctcttggttgg
ggctcgaaaggtgttgggacagattccattgcgataggtaagtctgcgacaacagcaggg
gcatcttctgttgttgtgggtgcccatatcgatgtgacaggtcaaaacttagtggcagtt
ggaagcctagcaagtgctgaaagtcatgctactgccttgggttatatggcctctgctggt
ggtaggagctctgttgctgtgggtgataatgccaaaacaaatggtagtgctgctagagca
accgcaattggtcataataccgttgtcaccgtgggtggcggtgtggcattaggttatgga
tctaatgcaaatacagctggcggtgtagaggggttaaaacaaactcattctgtcacaacg
gaaacaagcactgaagctaacggctttaaatccacacaaaaggttgatggtaataatatt
ggtgcagtttctgtcggtttagcaggtaataaactcatcaaacgccaaatcaccaacgtt
gctgcaggtaaagaattaaccgatgcggtaaacgtggcacagcttaaatcgctcaccatg
caaataggaggcgataacggcagtggcaaggtaggcatttggagtggtacgctcactgta
aaaggacaaaatggtattacttccgatgttaatggcagtacgattacggttaaattagat
aaagacctcaaagataaaattgataagattgccgctatgggtaagttaattcaaagtacg
gaaaaagaatcaaatggcaatctaaaaattacctatacagatggttcgcatagcattatc
cagaaaggtgaaaaaggagatcgtggtgaaaaaggagatcgtggcgaaactggccctgcg
ggtccagcaggtccaatgggtcctaggggtgagcgaggagaagctggccctgcgggtgca
gctggtccagcaggggctaggggtgaagctggtccagtgggtccagaaggaccgcgagga
cctgcgggtccaaccggtgctcaaggtccagcagggcctaggggtgaacagggtctaaaa
ggagatacaggtccagcgggagagccaggcaagcagggtcctaggggagagaaaggtgaa
attggtcctgcaggtccaaaaggagaggcaggagcaaaaggcgataagggtgacactggt
gaagcaggaccaataggccctcaaggtcctgcaggtgcagctggacctaagggtgaacag
ggtcctaaaggtgaacaaggtattcagggacctaagggtgacaaaggtgataccggtcag
aaaggtgaaacaggccctgcgggtccagtaggtccagctggaccacaaggtgtacctggt
cctgcaggtccaaaaggagaggcaggaccaaaaggagaggcaggaccagtgggccctcaa
ggtcctgcgggtccagcaggaccacaaggaccgcagggtccagcaggaccacaaggacct
acgggtccaacggggcctgctggtccaaaaggagaaaatgtgggccgtggtttaggtttg
aaagatgatgctgaatcaaataaaacggcacttacccctacagatgcacaaaaagctatt
gctggtgataacaaagacggtaaaggcggcttattggctcaaacgggtgatgcgttaaat
aatgtagcgacagtgaaagatttacaagccattgcacaagcgggcttagccttgacgggt
aacaacgccgataccactgtacatcgtccattgggtacgaagttaaccgttgagggtgaa
ggcaaatggaatggtaaggactcagcggctaataacctttatgtggaagcgcaagaggca
gataacaaacttgttgtgaaaatgaacagggatttaacgaacttaaattctgtgacttta
gacactgcgacaatgactggtgataagaatacaatcaaccttactggtgcaggagagaaa
gtcgaggaagagtttgttaaatgggacccagtgactaaacaacctattcttgatgagaat
ggcaatctccagaaatataaagagaaagttgatccccgtgtgaaactgagtggtattgct
gatggtgatatttcaccaaatagtactgatgcagtgaatggtcgccaagtttatgtttta
accaatcgtatcaggttcttccacaccaatgatggtcataatgcagaggagcaaattaac
cataagtcgaatacagtggactctcgtgcaacaggttcatactctactgcagttggttac
aaagctcacgcgaaaggggagagttctgttgctttaggtaacggggctacagctggagag
caaggcgtggctattggtcacggtgctgtggcgtcaggtaaacaatctatttcgattggt
accggcaatgtggtgagtggtaataactcaggtgctattggtgaccctaatacaattaaa
gcagatcgctcttatgcattaggtaataataaccaagtgaatgcaggtcaatctgatgtg
tttgttgtcggtaacaacgtgaaaaacacaaccagcaactcggtattcttgggtacaaac
tcaggctatgtggcagcaggtgcaaccactgcgggagcaggtgctttagaaagccaagta
acaggcggcgtgtataacgcttacgcaggtggcaaagctactgaagtgaaaggcgtggtg
agcgtgggtaatgtaaacagcgatggtacaatggaaactcgccgtattcaaaacgttgca
cctggtttaatctctgagcaaagtaccgatgcgattaatggtagccagttgtataatgtt
gcacatagattgggtgcgaagttagagagagaagggcgtcaacttcgtgcgggtattgct
gcaacaacggctatgagcaatattccacaagtgactttaccaggtaaaagcacattgggt
gctggtattggtactttcgagggacaaaatgcagttgctgttggattctcaagaatgtct
gataatggtcgtgtgattcttaaagtttctgcaggtgcaacttcgcaaggcaaatacaat
gctggtgcaggtattgcattacagtggtaa
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