Glaesserella parasuis SH0165: HAPS_0935
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Entry
HAPS_0935 CDS
T00825
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
hap
Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hap03009
]
HAPS_0935 (rumA)
Enzymes [BR:
hap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HAPS_0935 (rumA)
Ribosome biogenesis [BR:
hap03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HAPS_0935 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
TRM5-TYW2_MTfase
MTS
DREV
Methyltransf_15
Methyltransf_ANTKMT
Methyltransf_4
Cons_hypoth95
Methyltransf_23
DUF4770
Methyltransf_12
Methyltr_RsmB-F
PabTrmU54_TRAM_dom
DOT1
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ACL32562
UniProt:
B8F5G0
LinkDB
All DBs
Position
917496..918806
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AA seq
436 aa
AA seq
DB search
MALFYSDNSAKKSAKPTALQTFHIQSLDYQGFGVAKVNGKTWFIENALPNEKVEAKIIED
KRQYGRATAVRFLQKSADRQTPFCSIYSQCGGCQMQHIPLALQRETKQQTLFNRLQKLQA
EPIRFEPMLVGQGTNYRRRAKLSMVVQKNTLVVGFRQANTREIIPLNHCDILEPELNTLL
PKLQQLFASWKNKKQLGHIELVQADNGVALLLRHIGELHSQDSEKLQRFAEQEDLLLFVM
TDKDQISQWRGEVPYYQINGLTLHFSIRDFIQINREMNKQMVNKAIVWLDLQPTDRVLDL
FCGMGNFTLPIAPFVEEVVGIEGVEPMVAQAKQNAQTNQINNAKFYQTDLDKPFVDQPWA
KAYFNKALLDPARNGAYFALDHLCELQPERIVYVSCNPATLVRDAEKLIAKGYRLSQSAM
IDMFPHTGTFGVDFVV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcacttttttattctgataattccgcaaaaaaatccgcaaaaccgaccgctttacag
acctttcatatccaatctttagactatcaaggattcggcgtggcgaaagtcaatggcaaa
acgtggtttattgaaaatgcgttaccgaatgaaaaggtggaagccaagattattgaagat
aaacgccaatatggacgagcgacagcggtacgatttttacaaaaatctgcagatcgccaa
acgccattttgttcaatctatagccaatgcggtggctgtcaaatgcaacacattccactg
gctttacagcgagaaacgaagcaacagacgctttttaaccgtttacaaaaacttcaagca
gagcctatcagatttgagccaatgcttgtcgggcaaggcacaaactatcgccgtagagca
aagctgagtatggtggttcaaaaaaataccttagtggtcggctttcgccaagcgaatacg
cgagagattatccctctaaatcattgcgatattcttgagcctgaacttaatacgctttta
cccaaattacagcaactttttgccagttggaaaaataaaaaacagttagggcatattgaa
ctggttcaggcggataatggggtggcattgctgttacgccatatcggcgaacttcattca
caagacagcgaaaaattacaacgctttgcggaacaagaagatcttttgttattcgtgatg
acagataaagatcagattagtcagtggcgtggtgaagttccttattatcaaatcaacggc
ttaacgcttcacttttcgatccgtgattttattcaaatcaaccgagaaatgaacaagcaa
atggtgaacaaagcgatagtgtggctcgatctgcaaccgacggatcgtgtgcttgatctc
ttctgcggaatggggaattttaccttgcctatcgcaccgtttgttgaagaagtggttggt
atagaaggggttgagccgatggttgcacaagccaaacagaatgctcaaacaaatcagatt
aacaatgcgaagttctaccaaacggatctggataaaccttttgtggatcagccttgggct
aaagcatattttaacaaagcactactagacccagcacgcaatggggcttactttgcctta
gatcatctttgcgaattacaaccagagcggatcgtgtatgtttcttgcaatccagcaact
ttagtcagagatgccgaaaaactgattgcaaaaggatatcgtttaagccaatccgcaatg
attgatatgtttccccatacgggcacatttggagtcgatttcgttgtttga
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