Glaesserella parasuis SH0165: HAPS_0950
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Entry
HAPS_0950 CDS
T00825
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03030
DNA replication
hap03430
Mismatch repair
hap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAPS_0950 (holA)
03430 Mismatch repair
HAPS_0950 (holA)
03440 Homologous recombination
HAPS_0950 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hap03032
]
HAPS_0950 (holA)
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_0950 (holA)
Enzymes [BR:
hap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAPS_0950 (holA)
DNA replication proteins [BR:
hap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAPS_0950 (holA)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAPS_0950 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ACL32577
UniProt:
B8F5H5
LinkDB
All DBs
Position
complement(930639..931661)
Genome browser
AA seq
340 aa
AA seq
DB search
MQRIFPEGLEPALNKGLQPFYLLTGQDLLLVGEAKDCIVQTARLQDFDEKQEFTIANDTQ
WDMLFDLVQSNGLFFNRQILILNLPENLTVTQQKQLSELLAFSHTDLLFVLHQPKLTKAM
EKQSWFVQLNNAVVVNCQTPDITKLPIWLQHRAKTMQLQLEPDAIQLLCYSYEGNLLALK
QALQMLQLRFAEQKIGLNRAKEVIEQSAQFTPFQWVDALLEGKINRALRVLQHLQNEEIQ
PVVLLRIVQKELLLLLEMTRPPQPIINSHQPLYSGNLRTEFDRLKVWQNRRGFYQAAVQR
LTYRKLYKLIQSLAELEKQVKQEFSDEAWQGIERFSLLFH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtattttcccagaaggattagaacctgccctcaataaaggcttacagccgttt
tatttattgacagggcaggatcttttattggttggtgaagcaaaagactgtattgtgcaa
acggctcgtttacaggattttgatgaaaagcaagagtttaccattgccaatgatacccaa
tgggatatgttgtttgacctcgttcaatcaaatgggcttttttttaatcgccaaattcta
attcttaacctgcctgaaaacctaactgtaacacagcaaaaacagctatctgaactactg
gctttttctcacacggatttactttttgttctgcaccaaccaaaactaaccaaagcaatg
gaaaaacagagctggtttgtacaactaaataatgccgtagtcgtaaactgtcaaacacca
gatattacaaaactacctatttggctacaacatcgagctaaaacaatgcagttgcagctt
gagcctgatgctattcaattactttgttatagctacgaaggcaatctactggcactaaaa
caagcattgcaaatgctacaacttcgttttgctgaacaaaagattggattaaaccgagca
aaagaagtgatcgaacaatcggcacaattcaccccattccaatgggttgatgccttatta
gaaggaaaaattaaccgagcattaagagtgcttcaacatctgcagaatgaagagatacaa
ccagtggtgttgctacgcatcgtacaaaaagagctacttttattactggaaatgactcgc
ccaccacagccaattatcaatagtcaccaacctttgtatagcggtaatttacgaaccgaa
tttgaccgcttgaaagtatggcaaaaccgccgtgggttttatcaagctgcagtacaacgt
ttaacttaccgtaaactgtataaactcattcaatcccttgccgaattggaaaaacaggta
aaacaagaatttagtgatgaggcttggcaaggcattgaacggtttagtttgttatttcat
tag
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