Glaesserella parasuis SH0165: HAPS_0978
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Entry
HAPS_0978 CDS
T00825
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap00521
Streptomycin biosynthesis
hap00541
Biosynthesis of various nucleotide sugars
hap01100
Metabolic pathways
hap01110
Biosynthesis of secondary metabolites
hap01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HAPS_0978 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HAPS_0978 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HAPS_0978 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HAPS_0978 (rfbB)
00525 Acarbose and validamycin biosynthesis
HAPS_0978 (rfbB)
Enzymes [BR:
hap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HAPS_0978 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
ACL32603
UniProt:
B8F5K1
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Position
963987..964991
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AA seq
334 aa
AA seq
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MIRYIINNTQDLVINIDKLTYAGNLSSLEEISNSSRYAFKQIDICDKIALEQIFNEYQPD
IVMHLAAESHVDRSIKNSEVFIKTNIWGTYTLLEVARKYWNDLPEEKKSIFRFHHISTDE
VYGDLGTSERQFTEIMPYAPSNPYSASKAASDHLVHAWRRTYGVPTIVTNCSNNYGPFHF
PEKLIPLIILNAIEGKKLPIYGNGLQVRDWLFVEDHVRALYKVIKEGRVGESYNIGGDST
KSNLEVVYAICEILEELLPHKPKGVQKYKDLISYVPDRLGHDTRYAIDSTKIREELDWKP
QETFESGIRKTVEWYLNNQKWWKSIRKNNFSYSC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattaggtatattattaataatactcaagacttagtaattaatatagataaattaact
tatgcaggtaatttaagctcattagaggagatttctaatagttctcgttatgcatttaaa
caaatagatatttgcgataaaatagccttagagcagatatttaatgaatatcagccagac
atagtaatgcatttagctgcagaaagccatgtagatcgttctattaagaattcggaagta
tttattaagactaatatttggggaacttatactttattagaagtagctcgtaaatattgg
aatgatttgccagaggaaaaaaaatctatatttcgtttccatcatatttctactgacgag
gtttatggtgatttaggaacaagtgagaggcagtttacagaaatcatgccttatgctcct
tctaacccctattcggcatcaaaagccgcaagcgatcatttagtgcatgcttggaggcgt
acttatggggtaccaactatcgtaacaaattgctcaaataattatggtccctttcatttt
cctgaaaaattgattccattgatcatcttgaatgcaatagaaggaaagaaattaccaatc
tatggtaatgggttacaagttcgtgattggttatttgttgaagatcatgtgagagcttta
tataaggtaattaaagaaggtagagtgggagaaagttataatattggtggtgatagtaca
aaaagtaatctggaggtggtttatgctatttgtgaaatattagaagaactacttccacat
aagccaaaaggggtacagaaatataaagatctaatttcttatgtaccggatcgtctaggg
catgatactcgttatgctattgattcaactaaaattcgcgaagaattagattggaaacct
caagaaacttttgaaagtggaattcgtaagacagtagagtggtatttaaataatcaaaaa
tggtggaaaagcataagaaaaaataatttttcgtattcttgttaa
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