Glaesserella parasuis SH0165: HAPS_1067
Help
Entry
HAPS_1067 CDS
T00825
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03420
Nucleotide excision repair
hap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAPS_1067 (uvrD)
03430 Mismatch repair
HAPS_1067 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_1067 (uvrD)
Enzymes [BR:
hap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAPS_1067 (uvrD)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAPS_1067 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HAPS_1067 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
SpoIIAA-like
DUF4391
PhoH
DUF7432
Motif
Other DBs
NCBI-ProteinID:
ACL32685
UniProt:
B8F5T3
LinkDB
All DBs
Position
1061432..1063615
Genome browser
AA seq
727 aa
AA seq
DB search
MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIAWLIGVENIAESNILAV
TFTNKAAAEMRHRIEYTLSQSSDHRLFGMWVGTFHSIANRLLRSHYLDANLPQDFQIMDT
EDQQRLIKRLLKLHNLDEKQFPPKQVAWFINAQKDQGLRAKDLKQSHDDPHSQQLVKFYQ
IYQEACDRAGLLDFAELLIRAYELFKYNPLILQRYQQRFQHILIDEFQDTNNIQYDLIHL
LAGKTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYDNAQTIRLEQNYRSTGHILNSANA
LIANNDNRLGKNLWTDKGDGDPVDIYCAFNELDEARFVASQIKQWKEDEGDFNQCAVLYR
GNAQSRVIEEALIQANIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVVNTPP
RAIGDRTLDILRQLTRTRQITLWQAIQVAVQEEHLSGRSASALLRFVELINALEQETEEM
PLFEQTDFVIKKSGLYEMYKQEKGEKGEVRIENLEELVTATRQFVKPDEAEEMTDLTAFL
THASLEAGETQASLHQDYVELMTLHSAKGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEER
RLAYVGITRAKKKLTISYAESRRLYGKEERHLPSRFIGELPEEHIREVRLRGSINRPATF
AKPQANPTARLQEDSGWKMGQKVRHEKFGQGTIINVEGSGDHTRLQIAFVQQGIKWLIAK
VAKLEKM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttattacttgacggcttaaacgataaacaacgagaagcggtagcagcc
cctattggcaactatttagtgttagcaggtgcaggtagtgggaaaacccgtgtgcttacc
caccgtattgcgtggttaattggcgttgaaaatatcgctgagtccaatattcttgctgtg
accttcaccaataaagccgcagcggaaatgcgtcatcgtattgaatataccctatcgcaa
tctagcgatcaccgcttattcggtatgtgggtcggtacattccatagcattgctaaccgc
ttacttcgctctcattatcttgatgccaatctgccgcaagattttcagattatggatacg
gaagatcagcaacgtttgattaaacgcttactcaaattgcataatttagatgaaaagcag
tttccaccgaaacaagtggcgtggtttatcaatgctcaaaaagatcaggggctaagagca
aaagatctcaaacaatctcacgatgatccccattcacaacagctcgttaaattctatcaa
atctatcaagaggcttgtgatcgtgcagggttgttggactttgcagaactcttaatccgt
gcttatgaattattcaaatataacccattgattttacaacgttatcagcaacgttttcag
catattctgatcgatgaatttcaggataccaataacattcaatacgatcttattcattta
ttggcaggaaaaacgggcaaagtaatgattgtgggcgatgacgaccaatctatttacggc
tggcgtggtgctcaagtggaaaacattcaacgcttcttgaatgattatgacaacgcacaa
actattcgccttgaacaaaattaccgctccacaggacatattttaaattcggcaaatgcg
ttaattgcaaacaatgacaaccgcttagggaaaaatctttggacagataaaggcgacggt
gatcccgttgatatttattgtgcattcaatgaattagatgaagctcgctttgtcgcttca
cagattaagcaatggaaagaagatgaaggtgattttaatcaatgtgctgtgctttatcgg
ggtaatgcccaatctcgtgttattgaagaagccttaattcaagccaacattccttaccga
atttatggcggaatgcggttctttgaacgccaagagatcaaagatgccctagcctattta
cgtttaatcgctaaccgccaagatgatgctgcctttgaacgtgtggtcaatacaccgcca
agagcaataggggatcgcaccttagatattttgcgtcagcttactcgaactcgccaaatc
accttgtggcaagcaatccaagtggctgttcaagaagaacatctctcagggcgttccgcc
tcagccttgcttcgctttgtcgaactgattaacgcacttgaacaagaaaccgaagaaatg
ccactgtttgaacagacggattttgtgattaaaaaatctgggctttatgaaatgtataag
caagaaaaaggggaaaaaggcgaagttcgtattgagaacttagaggagttagtgactgca
acacgccaatttgtaaaaccagatgaagcagaagagatgaccgatctcaccgctttctta
actcacgcctcccttgaagctggcgaaacacaggcttcactacatcaagattatgtggaa
ttaatgacattacattcagccaaaggcttagaatttccacgggtgtttatcgttggggtt
gaagaagggattttcccaagcggaatgagcttcgacgaaggtcgcttgcaagaagaacgt
cgcttggcttatgtcggtattacacgagcgaagaaaaaactcacgatcagctatgccgaa
agtcgccgcttgtacggtaaagaagaacgccatttaccttcacgttttattggcgagctg
cctgaagagcatatccgggaagtccgcctgcgtggaagtatcaatcgccctgctactttt
gcaaaaccacaagctaatccgaccgctcgtttacaagaagatagtggttggaaaatgggg
cagaaagttcgccacgagaaatttgggcaaggaacaatcatcaatgtagaaggcagcggt
gatcatactcgcctgcaaattgcctttgtacaacaagggattaagtggttaattgccaaa
gtggcgaagttggaaaagatgtaa
DBGET
integrated database retrieval system
