Glaesserella parasuis SH0165: HAPS_1508
Help
Entry
HAPS_1508 CDS
T00825
Symbol
ffh
Name
(GenBank) signal recognition particle GTPase
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap02024
Quorum sensing
hap03060
Protein export
hap03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HAPS_1508 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HAPS_1508 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HAPS_1508 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hap02044
]
HAPS_1508 (ffh)
Enzymes [BR:
hap01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HAPS_1508 (ffh)
Secretion system [BR:
hap02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HAPS_1508 (ffh)
Eukaryotic Sec-SRP protein
HAPS_1508 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_30
AAA_31
cobW
AAA_33
AAA_14
AAA_28
DO-GTPase1
AAA_16
T2SSE
YqeC
APS_kinase
AAA_24
NACHT
Helicase_RecD
AAA_19
AIP3
Rad17
ABC_tran
KTI12
TsaE
ATP_bind_1
TPP_enzyme_M
VirC1
Thymidylate_kin
CGDB
Motif
Other DBs
NCBI-ProteinID:
ACL33065
UniProt:
B8F6W3
LinkDB
All DBs
Position
complement(1484885..1486267)
Genome browser
AA seq
460 aa
AA seq
DB search
MFENLSDRLSKTLKNITGKGRLTEDNIKDTLREVRIALLEADVALPVVREFINKVKERAI
GEEVNKSLTPGQEFLKIVQAELEKAMGEANEGLNLATQPPAVILMAGLQGAGKTTSVGKL
AKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFFPTETSQKPVDIAEAALKHAK
LNFFDVLIVDTAGRLHVDGEMMEEIQQIHSVLNPIETLFTVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDLQRSVDQEKAEKMAAKFKKGDDFTLDDFREQLVEMKKMGGMMSMLDKLPGAKNL
PDHVKNQVDDKMFIKMEAIINSMTLKERANPDIIKGSRRRRIALGSGTQVQDVNKLLKQF
DEMQRMMKKMRKGGMAKMMRGMKGMMGGGLGGLGGMFGKR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctatccgacagactatccaaaaccctaaaaaacattacggggaaaggg
cgtttaaccgaagataacattaaagataccctgcgtgaagtgcgtattgcgttgctagaa
gccgatgtggctttgcctgtggtgcgtgagtttatcaataaagtcaaagagcgtgctatt
ggtgaagaagtcaataagagcttaacgccagggcaggagttcctgaaaatcgtgcaagct
gagcttgaaaaagcgatgggcgaagcaaatgaagggctgaaccttgccacccaaccgcca
gcggtaattttaatggctggtttgcagggggctggtaaaaccacgtctgttggtaaattg
gcgaaattcttaaaagaacgccataagaaaaaagtgcttgtggtgtctgctgacgtttat
cgtccagcggcgattaaacagcttcaaacgttggctgaagcgttaaaagtcgatttcttc
ccgacagaaacctcgcaaaaaccggtagacattgccgaagcagcattaaaacacgccaaa
ctcaatttctttgatgtgttaattgtcgataccgcaggtcgcttgcacgttgatggcgag
atgatggaagagatccagcaaattcactcggtgttaaacccgattgaaaccttgtttact
gtcgatgcaatgacgggtcaagatgcggcaaacacggcaaaagcctttaacgaagccttg
ccgcttacgggggtaattttaaccaaagtcgatggtgatgctcgtggcggtgcggcttta
tctattcgtcaaattaccggcaaaccgattaaattcttaggggttggcgagaaaaccgat
gcccttgagccgttccaccctgatcgtatcgcttcacgcattttaggtatgggcgatgtg
ctgtcgttgattgaagatttacaacgttctgtcgatcaggaaaaagccgaaaaaatggcg
gcaaaattcaagaaaggcgatgattttacccttgatgatttccgtgaacagctggtggaa
atgaaaaaaatgggcggtatgatgtcgatgcttgataaattacctggggcgaagaattta
ccggatcacgttaaaaatcaagtcgatgacaaaatgttcatcaaaatggaagcgatcatc
aattcaatgaccctgaaagagcgtgccaacccagacattatcaaaggttcacgccgtcgc
cgtattgcgttaggttcaggaacgcaagtgcaagatgtgaataaactgctcaaacagttt
gacgaaatgcaacgtatgatgaaaaaaatgcgtaaaggcggtatggcgaaaatgatgcgt
ggtatgaaaggaatgatgggcggtggtcttggtggtttaggtggaatgtttggaaagaga
tag
DBGET
integrated database retrieval system
