KEGG   Glaesserella parasuis SH0165: HAPS_1719
Entry
HAPS_1719         CDS       T00825                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hap  Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:hap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hap02048]
    HAPS_1719 (hsdR)
Enzymes [BR:hap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     HAPS_1719 (hsdR)
Prokaryotic defense system [BR:hap02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   HAPS_1719 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ACL33241
UniProt: B8F7D9
LinkDB
Position
complement(1693241..1696201)
AA seq 986 aa
MNYAESIIENKLIKKLQDLKYIFREDICDRQSLEENFREKFEQLNRVRLTDSEFERLKLE
IITPDVFAVAKRLRETSTFIREDDTPLNYTLVNIKDWCKNDYEVISQLRINTENSHHRYD
VILLINGIPVVQIELKTLQIPPKKAIEQIINYKNDTGNGYGNSLLCFMQLFIVSNESSTY
YFANNQNKHFAFQTDERFLPVYRLADEANNKINYLYDFADKFLEKCTLGKMISHYMVLVA
SEQKLLMMRPYQIYAVKAIVDCIHQNRGNGYIWHTTGSGKTLTSFKASTLLKNNPDIDKC
LFVVDRKDLDRQTREEFNRFQEGSVEENTNTSTLVNRLLSNDYADKVIVTTIQKLGLALK
ENSTHHRQLSTLKDKRMVFIFDECHRSQFGENHQAIKKFFPKAQLFGFTGTPIFEENATY
KRIDGTDAFYQTTEDIFEQQLHAYTITNAIDDGNVLKFHIDYYKAEGGKPVSANHPVTKQ
AIVDSVLSKHDAATSERRFNAIFATASINDAIDYYRILKEAQTKFQADNPDFVPLNIACV
FSPPAEGNQDIAQIQADLPQEEQDNKDDPNGKKAALKAIIDDYNAQYRTNHSIGEFDLYY
QDVQKRIKDHQYSDKDYPHSNKIDITIVVDMLLTGFDSKYLNTLYVDKNLKYHGLIQAFS
RTNRVLNSAKPYGNILDFRGQQAQVDEAIKRFSGQDQDRAKEIWIVDPAEIVITKLQNAM
TQLEDFMSSQGLTCTPSEAHNLKGDNARAGFINLFKEVQRYKTQLGQYTDLSEEQKQTVE
NILQNDTQRAFKGVYLDIARQIKEQALYGKTPPSPELEQLDFEFVLFSSVTIDYDYIMKL
IAENSSKPKKQQMSRTQLVELVAASSDLMDEKDDIIAYIDSLKAGEALNEQEVKAGYQAF
RNAKTNAKLTALAQKHGITTDTLRGFIEEILNRMIFDGEKLTDLLEPLELSWKERRIKEL
ALMEDLVPLLKNMAKGKEISGLKAYE
NT seq 2961 nt   +upstreamnt  +downstreamnt
atgaactatgctgaatccattatcgaaaataaactaataaagaaattacaagatttaaag
tatatttttcgagaagatatttgtgacagacaatcactggaggaaaattttcgtgagaaa
tttgaacagttaaaccgcgttcgtttaaccgatagcgaatttgagcgcttaaagcttgaa
attatcacaccggatgtctttgccgttgctaagagactgcgtgaaactagcacctttatc
cgcgaagatgacacaccgctcaattatacgctggtaaatatcaaagattggtgcaaaaac
gactacgaagtgatcagccagttgcgtatcaacacggaaaacagccatcaccgctacgat
gtgattttattgattaacggtatacctgttgttcaaattgagctgaaaaccctgcaaatt
ccacccaaaaaagccattgagcaaatcatcaattataaaaatgacacaggcaacggctac
ggcaacagtttactgtgttttatgcaattgtttattgtgagcaatgagagtagtacctat
tactttgccaacaatcaaaacaaacatttcgcttttcagacagacgaacgttttttaccg
gtataccgtcttgccgatgaagcaaacaataaaattaattacttgtatgattttgccgat
aaatttttggaaaaatgcacgttaggcaaaatgatcagccattatatggtgttggtagca
agcgaacaaaagcttttgatgatgagaccgtatcagatctatgccgtcaaagcgattgtg
gactgtattcaccaaaaccgaggtaacggctatatttggcataccacaggttcaggcaaa
acactcacttcattcaaagcctccacattactcaaaaataatcccgatattgataaatgc
ttgtttgtagtagacagaaaagacctagaccgtcaaacacgtgaagaatttaaccgcttt
caagaaggttcggtagaagaaaataccaatacttctactttagtcaaccgcctactttcg
aatgattacgccgataaagttatcgtaactaccattcaaaagctggggttggcactcaaa
gaaaatagtacccaccatagacaattaagcacactcaaagataaacgaatggtttttatt
tttgacgaatgccatcgctcccaatttggagaaaatcatcaggcaatcaagaaattcttt
ccaaaggcacaattatttggttttaccggcacgccgatttttgaagaaaacgcaacatac
aagcgtatcgacggcacagatgcgttctatcagaccaccgaagatatttttgaacagcaa
ttacacgcttacaccattaccaatgccattgacgacggtaatgtattgaaattccatatt
gattattacaaggcggagggaggtaagcccgtatctgccaatcatcccgttaccaagcag
gcgattgtggactccgttttaagcaaacacgatgcggccacttccgaacgtcgtttcaat
gctatttttgctaccgcatccattaatgatgcgattgactattaccgcattttaaaagaa
gcacaaaccaagtttcaggcggataatcccgatttcgtgccgcttaatatcgcctgcgtg
ttttccccgcccgccgaaggcaatcaagatatagcccaaatccaagccgatttgcctcag
gaggaacaagacaataaagatgatccgaacggcaagaaagccgccttaaaagccattatt
gatgactacaatgcacaataccgcaccaatcacagtatcggcgaatttgatctatattac
caagatgtgcaaaaacgaattaaagaccaccaatactccgataaagattatccacacagc
aacaaaattgatatcactattgttgtcgatatgttacttacgggatttgacagcaaatat
ttaaataccctttatgtagacaaaaatctgaaatatcacgggttaattcaagctttttcc
cgaactaaccgcgtattaaattctgccaaaccctacggtaatatcttggatttccgcggg
cagcaggcgcaagtagatgaagccatcaagcgtttttcaggtcaagatcaagaccgagcc
aaagaaatctggattgttgacccagcggaaatcgtcataacaaaactgcaaaacgccatg
acgcaactggaagatttcatgtcatcgcagggattgacctgtacgccgtctgaagcacat
aacctgaaaggagacaacgcccgagccggatttatcaatctatttaaagaagtgcagcgt
tataaaacccagttaggacaatatactgatttaagtgaagagcaaaagcagacagtcgaa
aatattttacaaaacgatactcaacgtgcctttaagggtgtatatctggatatagcacga
caaatcaaagaacaagcgttatatggaaaaacgccaccatcgccagagcttgagcaatta
gactttgaatttgtgttgttttcatccgtaaccattgattacgactacatcatgaaacta
attgctgaaaactcatccaaaccgaaaaaacagcagatgagccgcacgcaattagtagag
ctagttgccgccagcagcgatttgatggatgaaaaagatgatatcattgcctatatagac
agcctaaaagccggtgaagcactcaacgagcaagaagttaaagccggctatcaggcattc
agaaacgcaaaaacaaacgcaaaactgaccgctcttgcacaaaaacacggtattacaacc
gatactttgagaggctttatcgaagaaatcctaaaccgtatgatttttgacggtgaaaag
ctcaccgacttactcgaacctttggaattaagctggaaagaacgccgcattaaagaatta
gccttaatggaagacctcgttcccttgctgaaaaatatggcaaaaggaaaagaaatttca
ggcttgaaggcgtatgaataa

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