Glaesserella parasuis SH0165: HAPS_1911
Help
Entry
HAPS_1911 CDS
T00825
Symbol
rsmB
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
hap
Glaesserella parasuis SH0165
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hap03009
]
HAPS_1911 (rsmB)
Enzymes [BR:
hap01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HAPS_1911 (rsmB)
Ribosome biogenesis [BR:
hap03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HAPS_1911 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_31
Methyltransf_25
Methyltransf_5
Methyltransf_12
Methyltransf_37
Methyltransf_15
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ACL33399
UniProt:
B8F7U7
LinkDB
All DBs
Position
1874290..1875588
Genome browser
AA seq
432 aa
AA seq
DB search
MKKHSTRAVTAQIILQVLDQGKSLSTLIPEAQSQLDSKDLAWVQETTFGICRVLPRLEAI
IKLLVEIPLKNKTRLVHCLLLVGLYQLLYMRVPPHAAVDEVVNATKVLKLDSFRALTNGV
LRRFLREQEAILAKVDKHWQTLHPEWLVNKLKQAYPNWREIVDANNQKPPMWIRVNAQRT
NRADYVALLGDLAKNHKEATACVPDCAVLLDKAVSVSQLPHFKQGWVAVQDAHAQWSAEL
LDAQNGELILDACAAPGGKTTHILEKAPQAKVIALDIEEARLVRVKENLARLNQTATVIC
GDASQPEQWLTSGEMFDKILLDAPCSATGVIRRHPDIKWLRKEEDIAGLAELQGKILKAL
WARLKPNGVLLYATCSVLPEENSQQIQHFLAQTPEAKLVEINVGGEQCLMKQFFPKQDGG
DGFFYAKLVKQA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacattccactcgtgccgttacggcacagattattttacaggtgttggatcag
ggcaaatccctttcaaccttgatccccgaagcacaatcgcaacttgatagtaaagattta
gcgtgggtacaggaaacgacctttggcatttgccgtgtgttgcctcgtttagaagcgatt
atcaaattattggtagaaataccgctgaaaaacaaaactcgcttggtgcattgtttgctt
ttggttggcttatatcagctactttatatgcgagtaccaccacacgctgcggtagatgaa
gtggttaatgcgacaaaagtgttaaagttagatagctttcgagccttgactaacggagta
cttcgccgttttctgcgtgagcaagaagcaattttggcgaaagtggataaacattggcaa
acactacaccctgaatggttggtgaataagctgaaacaagcctatccgaattggcgagag
attgttgatgcaaataaccaaaaaccgccgatgtggattagggttaatgctcaacggact
aaccgagcggactatgtggcattgttgggtgatcttgcaaaaaatcacaaagaagcgacc
gcttgcgtgcctgattgtgccgttttattagataaagcggtgtcggtcagccagcttccc
cactttaagcaaggctgggtggcagtgcaagatgcacacgcacaatggtctgccgaatta
cttgacgcacaaaatggcgagttgattttagatgcctgtgcggcaccggggggcaagaca
acccatattttggaaaaagcaccgcaagcaaaagtaattgcattagatattgaagaagcc
cgtttagttcgggttaaagagaatttagctcgtttaaaccaaacggcaacggtgatttgc
ggtgatgccagccagcctgaacagtggcttacaagcggtgagatgttcgataaaatttta
cttgatgccccttgttctgcaacgggggtaatccgtcgtcacccagatattaaatggcta
cgcaaagaagaagatattgctgggttggcagaattacaggggaaaattctcaaagcactt
tgggcaaggctcaagcccaacggtgtgttgctgtatgctacttgttctgtgttaccagaa
gaaaacagtcagcaaattcagcactttttagctcaaaccccagaggctaaattagtcgaa
atcaatgtgggtggcgagcaatgtttaatgaagcaattctttcctaaacaagatggggga
gatggatttttctatgcgaagttagtgaaacaggcgtaa
DBGET
integrated database retrieval system
