Glaesserella parasuis SH0165: HAPS_2058
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Entry
HAPS_2058 CDS
T00825
Symbol
groEL
Name
(GenBank) chaperonin GroEL (HSP60 family)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAPS_2058 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hap03019
]
HAPS_2058 (groEL)
03110 Chaperones and folding catalysts [BR:
hap03110
]
HAPS_2058 (groEL)
03029 Mitochondrial biogenesis [BR:
hap03029
]
HAPS_2058 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hap04147
]
HAPS_2058 (groEL)
Enzymes [BR:
hap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HAPS_2058 (groEL)
Messenger RNA biogenesis [BR:
hap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HAPS_2058 (groEL)
Chaperones and folding catalysts [BR:
hap03110
]
Heat shock proteins
HSP60 / Chaperonin
HAPS_2058 (groEL)
Mitochondrial biogenesis [BR:
hap03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HAPS_2058 (groEL)
Exosome [BR:
hap04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HAPS_2058 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
HAPS_2058 (groEL)
Exosomal proteins of breast cancer cells
HAPS_2058 (groEL)
Exosomal proteins of colorectal cancer cells
HAPS_2058 (groEL)
Exosomal proteins of bladder cancer cells
HAPS_2058 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
ACL33517
UniProt:
B8F865
LinkDB
All DBs
Position
2014944..2016587
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVVLDKAFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVAAVVEELKSLSKPCETSKEIEQVGTISANSDSTVGKLIAQAMEKVGKEGVITVEDG
TGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENPYILLVDKKISNIREILPVLEAV
AKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGMELEKATIEELGQAKRVVISKDNTTIIDGVGDEVQIKARVAQIRQQIEDSTSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIIAGGGVALV
RAASKVADVVKGDNEEQNVGIRLALRAMEAPLRQIVTNAGEEASVVARNVKDGNGNYGYN
AATEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMVTDLPKEEKADLGAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtaaaatttggtaacgacgctcgtgtgaaaatgttaaagggcgtg
aatgtattagcagatgcagtaaaagtaactttaggtccgaaaggtcgtaacgtggtatta
gacaaagcctttggcgcaccaaccatcactaaagacggtgtatccgttgctcgtgaaatc
gaattagaagataaattcgagaatatgggtgcgcaaatggttaaagaagtggcatctaaa
gcaaatgatgcagcaggtgacggtacaactactgcaactgtacttgctcaagctatcgta
aatgaaggtttaaaagcggttgcagctggtatgaacccgatggatttaaaacgaggtatc
gacaaagcggtagcagcagttgttgaagagttaaaatcgctctctaaaccgtgtgaaacg
tcaaaagagattgaacaagtcggtacgatttctgcgaactcagacagcactgtgggtaaa
ttaattgctcaagcaatggaaaaagtcggcaaagaaggcgtaattaccgttgaagatggc
actggcttagaagatgcgttagatgtggttgaaggtatgcaattcgaccgtggttactta
tcgccatatttcatcaataaaccagaagcgggcacggtagaattagaaaacccatacatt
cttttagtggataagaaaatttcaaatatccgtgaaattctgcctgtattagaagcagta
gcaaaagcgggcaaaccattattgattattgcagaagatattgaaggcgaggcgttagca
accttagttgtgaacacaatgcgtggtatcgtgaaagtggctgcggttaaagcgccaggc
tttggcgatcgtcgtaaagcgatgttacaagacattgcgattttaactgcgggtacggtt
atctctgaagagatcggtatggaacttgaaaaagcgactatcgaagagcttggccaagca
aaacgtgtggtgatttcaaaagacaataccaccatcattgacggcgttggcgatgaagta
caaatcaaagctcgtgttgcacagatccgccaacaaatcgaagactcaacctcagactac
gacaaagagaaactacaagagcgtgtggctaaattggctggcggtgttgcagtaatcaaa
gtcggtgcggcaactgaagttgaaatgaaagagaaaaaagaccgtgtagatgatgcgctt
cacgcaacccgtgcagctgtggaagaaggtatcatcgcaggcggtggcgtggcattagtg
cgtgcggcaagcaaagtggctgatgtagtgaaaggcgataacgaagaacaaaacgtaggt
atccgtttagcacttcgtgcaatggaagcaccacttcgccagatcgtgacaaacgcaggt
gaagaagcgtctgttgttgctcgtaacgtaaaagatggcaatggtaactacggctataac
gctgcaactgaacaatacggcgatatgttagaaatgggtatcttagacccaactaaagta
acccgttctgcattacaatttgcagcctctatcgcaggtttaatgattacgactgaatgt
atggtgacagatctgccgaaagaagaaaaagctgacctaggtgccggaatgggcggtatg
ggtggcatgggcggaatgatgtaa
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