Glaesserella parasuis SH0165: HAPS_2231
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Entry
HAPS_2231 CDS
T00825
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hap
Glaesserella parasuis SH0165
Pathway
hap03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAPS_2231 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hap03400
]
HAPS_2231 (uvrB)
DNA repair and recombination proteins [BR:
hap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAPS_2231 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAPS_2231 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF5683
UB2H
EAD9
Motif
Other DBs
NCBI-ProteinID:
ACL33663
UniProt:
B8F8L1
LinkDB
All DBs
Position
complement(2195031..2197046)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKQGKPFILHSPFKPSGDQPTAIAKLVEGLNDGLAHQTLLGVTGSGKTFTIANVIATLN
RPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGEMIDQRKILSRLA
ELQYTRNDQAFQRATFRVRGEVIDIFPAESDDVALRVELFDDEIENLSLFDPLTGHNLGR
VPRYTIYPKTHYVTPRDRILEAIEQIKKELAERRTYFIKENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEPPPTLFDYMPSDGLLIIDESHVTVPQIGGMFRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLSPQTIYVSATPGPYELEKNPDVIDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQQKYNEEHGIVPQALNKKVGELLD
IGQTDKPKRSKKSAKSSDDQTAYTPKSRKELEKELKVLEQQMRDFAKDLEFEKAAAVRDK
IHQLKAYLLEL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacagggtaaaccatttattttacattcccccttcaaaccctcaggcgaccaa
ccgactgcgattgccaaattagtcgagggattgaatgatggcttggcacatcaaaccttg
ctaggtgtaacaggatcgggcaaaacctttaccattgccaatgtgattgcgactttaaac
cgtccagcaatggtgcttgccccgaacaaaacccttgcggcacaactttatgccgagatg
aaagcctttttccctgaaaatgcggtggagtatttcgtttcctactacgactactatcag
cctgaagcctatgtgcctgccagcgatacttttattgaaaaagatgcgtctatcaatgag
cagatcgaacagatgcgactgtctgccaccaaatcttttttagaaagacgggatacgatt
gtagtcgcatcggtgtcggcaatttacggcttgggagatgtagatgcctatatgcagatg
atgttacatctgcaagtgggggaaatgatcgaccaacgcaaaattctctctcgccttgct
gaattacaatatactcgtaacgatcaagcctttcagcgggcgactttccgtgtgcgtggt
gaagtgattgatattttccctgccgaatcggacgatgttgctctgcgtgtggagctgttt
gatgatgaaatcgaaaacctttctttattcgatccgcttacagggcataatttagggcga
gttccccgttatacaatctacccgaaaactcactacgttacgccgagagatcggatttta
gaagcgattgagcagatcaaaaaagaacttgccgagcgtcgaacttactttatcaaagag
aataaattgcttgaagaacagcggatcgcccagcgtactcagtttgatattgagatgatg
aacgagttgggctactgctcaggcattgaaaactactcacgttatttatcgggcagaaaa
gagggcgaaccgcccccgaccttgtttgactatatgccgtctgacggcttgctgattatt
gatgagtctcacgtcaccgtgccacaaatcggcggtatgtttaggggcgaccgagcaaga
aaagaaactttggtgcaatacggtttccgtttgccatctgctttagacaaccgtccgttg
cgttttgaagagtttgaacgcttatcgccacagacaatctatgtatcggcaacccctgga
ccttacgaattagagaaaaatcctgatgtaatcgaccaagtggttcgtccgactggcttg
ttagatccgattatcgaagttcgccctgtggcaacgcaagttgatgatttattgtcagaa
attcataagcgtgtggcggtagatgaacgagtgctagtcaccacgctgacaaaaaaaatg
gcggaagatttaacggactacctagacgaacacggcgtacgagtgcgttatctacatagc
gatattgacacagtcgagcgggttgaaattatccacgatttgcgaatgggaatgtttgat
gtgttagtggggatcaacctactgcgagaaggtttggatatgccggaagtgtcgctggtg
gcgattttagacgctgacaaagaaggctttttgcgttccgaacgctctttaatccaaacc
atcgggcgtgctgcccgaaacctcaacggcaaagcgattttatacggcgaccgtattacc
aattcaatgcaaaaagcgatcaccgaaactgaacgccgtcgagagaaacaacaaaaatac
aacgaagaacacggcattgtgccacaagcattgaacaaaaaagtcggcgagttgcttgat
attgggcagacggataaaccgaaacgcagtaagaaatctgcaaaatcaagcgatgatcag
accgcttacacgccgaaatctcgcaaagagttagaaaaagaactgaaagtgcttgaacaa
cagatgagagattttgctaaagatcttgagtttgaaaaagcggctgcggtgagggataag
attcatcagttgaaggcgtatttgttagaactttaa
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