Haloplanus rubicundus CBA1112: DU484_00865
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Entry
DU484_00865 CDS
T05557
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_00865
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_00865
Prokaryotic type
Archaeal type
TFB
DU484_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AXG08510
UniProt:
A0A345E8I8
LinkDB
All DBs
Position
pCBA1112-01:222877..223851
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AA seq
324 aa
AA seq
DB search
MSLRNVYERTFDEDVPAAERSSSGCPECGGLVHTNSIETVCDDCGLVLEDCPIDHGPEWC
AFDEAEHIERTRTGPALTPTRHDRGLSSEIGFDQTDANGTTLSGRKRSQIGRLRREHRRG
RWSSKAEQNLAHGFSEVRRIVGALDLPRSLRDQACRLYRTAAGEDLIRGRSIEAMAAASV
YAACRCAGLPRTLQEVSVTSAVSHEGVQNAYSVLNRELELPTVPMEPLEYVPKVTSALGL
SAGTRQRAAALAKQAVRTGVANGYNPAGVAAGCVYQAAREQDERVTQAALADAAEVTPMT
VRVRSNELQTVLDGGDDQPRRGNA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgagaaacgtctacgagcggacattcgacgaggacgtccccgccgccgagcgg
tccagcagcggctgtccggagtgcggcggcctcgtccacacaaacagtatcgagaccgtc
tgtgacgactgcgggctcgtcctcgaggattgtccgatcgaccatggcccggaatggtgc
gccttcgacgaagcagagcacatcgaacgcacgcggactggtccggcgctgaccccgacc
cgccacgaccgggggctgtcgagcgagattggcttcgaccagaccgacgccaacggtacg
acgctgtcgggccgaaagcggagtcagatcggccgtcttcggcgcgagcatcggcgcggc
cgctggtcaagtaaggccgagcagaacctggcccacggcttttcggaggttcgacggatc
gtcggcgcactcgatctcccacggagcctccgcgaccaggcctgtcgcctctaccgaact
gctgccggcgaggacctcatccgtggccggtcgatcgaggcgatggctgccgccagcgtc
tacgccgcgtgtcggtgtgccgggctgccccgaacgctccaggaagtcagcgtgacctcg
gcagtctcccacgagggcgttcagaacgcatacagcgtgctcaaccgggagctcgaactt
ccgacggtaccgatggagcctctcgagtacgtcccgaaagtcacctcggcactcggcctc
tcggcggggacccgccagcgagcagcggcgctcgcgaaacaggcagtgcgcaccggtgtc
gcgaacggatacaatcccgcgggtgtcgcggctggctgtgtgtatcaggcagcccgagaa
caggacgaacgggtcacccaggcagcgctcgccgacgctgccgaggtcaccccgatgacg
gtccgtgtgcggtcgaacgaactccagaccgttctcgacggtggagacgaccagcctcgg
cgggggaacgcgtga
DBGET
integrated database retrieval system
