Haloplanus rubicundus CBA1112: DU484_01780
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Entry
DU484_01780 CDS
T05557
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_01780
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_01780
Prokaryotic type
Archaeal type
TFB
DU484_01780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
DUF7129
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AXG08688
UniProt:
A0A345E916
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All DBs
Position
complement(175362..176222)
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AA seq
286 aa
AA seq
DB search
MSQARMECPECSGRLNTEGTETVCGQCGLVVDEYRIDHGPEWRSFADDDTNPERTGAPLV
QSRHDRGLSTDIGRSTRVKGRKRRRLSRMRTQHNRAQISTKRERNQVYAFTEIRRLVGAL
SLPTHVRESACSLFRSAQEADLLRGRSLEGFASATVYATCRVCSVSRTVEEVVDAAKATE
DEHRAAYRALNRELDVATGPIHPVEYVPRYASELDVSESVRRRAEEHARRLRESGDAAGR
NPSGVAAACLYTAAREAGASLTQQAAADVADVTPVTVRNTYRLLQD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggcacggatggagtgtccggagtgcagcggtcgactgaacaccgagggaacc
gagacggtctgtggccaatgtggcctcgtcgtcgacgagtaccggatcgatcacggtccc
gagtggcggtccttcgcggacgacgacacgaaccccgagcggacgggcgcgccgctcgtc
cagtcgcgtcacgaccgcggcctctcgaccgacatcggacggtcgacgcgggtgaaaggc
cggaagcgccggcgactctcccgcatgcggacccagcacaatcgggcacagatttccacg
aagcgcgagcgtaaccaggtgtacgcgtttaccgaaattcggcggctcgtcggcgcgctg
tcgctcccgacacacgtccgggagtcggcgtgttcgctctttcgctcggcacaggaggcc
gacttactccgcggccggtcgctggagggcttcgcctccgcgacggtgtacgccacctgt
cgggtgtgttcggtctctcgcaccgtcgaggaagtcgtcgacgccgccaaggccaccgag
gacgaacaccgggcggcctaccgtgcgctgaaccgcgaactcgacgtcgcgaccggcccg
atccaccccgtcgagtacgtcccgcggtacgcgagcgaactcgacgtgagcgaatccgtg
cgccggcgggccgaggaacacgcccgtcgactccgcgagtcgggcgacgccgccggccgg
aatccgagcggcgtcgccgccgcctgcctctacaccgccgcccgcgaggccggcgcgtcg
ctcacccaacaggccgccgccgacgtggccgacgtgacgcccgtcaccgtccgcaacacc
taccgactgctgcaggactga
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integrated database retrieval system
