KEGG   Haloplanus rubicundus CBA1112: DU484_02175
Entry
DU484_02175       CDS       T05557                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
haq  Haloplanus rubicundus CBA1112
Pathway
haq03030  DNA replication
haq03410  Base excision repair
haq03420  Nucleotide excision repair
haq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU484_02175
   03410 Base excision repair
    DU484_02175
   03420 Nucleotide excision repair
    DU484_02175
   03430 Mismatch repair
    DU484_02175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haq03032]
    DU484_02175
   03400 DNA repair and recombination proteins [BR:haq03400]
    DU484_02175
DNA replication proteins [BR:haq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DU484_02175
DNA repair and recombination proteins [BR:haq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DU484_02175
   MMR (mismatch excision repair)
    Other MMR factors
     DU484_02175
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    DU484_02175
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AXG08761
UniProt: A0A345E989
LinkDB
Position
complement(256239..256982)
AA seq 247 aa
MFKAIVSASTLRDALDSVSVLVDECKVRLNEDGLSIRAVDPANVGMVDLSLDSAAFESYE
ADGGVIGVNLARLEDIAGMGNAGDLVHLELDEETRKLHIRIDGLSYTLALIDPDSIRQEP
DIPDLDLPARIVVEGNQLDRGITAADMVSDHINLRVDEDAETFHIEAEGDTDDVDFEMGP
DDLIDLEAGPADSLFSLDYLKDMNKAIPGDAEVTIELGEEFPVKLHYEFAEGLGNVTFML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgcgtcgacgctccgggatgccctcgactccgtgagcgtg
ctggtcgacgagtgcaaggtacggctcaacgaggacggcctgtcgatccgtgcggtcgat
ccggcgaacgtgggcatggtcgatctctcgctcgattcggccgccttcgagtcctacgag
gccgacggcggtgtcatcggcgtcaacctcgcccgtctcgaagacatcgccggtatgggc
aacgcgggggacctcgttcacctcgaactcgacgaggagacccgcaagctccacatccgc
atcgacgggctgtcctacacgctcgcgttgatcgaccccgactcgatccggcaggagccg
gacatccccgacctcgatctgccggcacggatcgtcgtcgagggcaaccagctcgaccgc
gggatcacggccgcggacatggtctccgatcacatcaacctccgcgtcgacgaggacgcc
gaaaccttccacatcgaggccgagggcgacaccgacgacgtggacttcgagatgggtccc
gacgacctcatcgatctggaggccggcccggccgactcgctgttctcgctcgactacctc
aaggacatgaacaaggcgatccccggcgacgccgaggtcaccatcgaactcggcgaggag
ttcccggtgaagctgcactacgagttcgccgagggtctcggcaacgtgaccttcatgctc
gcgccgcgcatccagagcgactga

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