Haloplanus rubicundus CBA1112: DU484_03170 Help Entry DU484_03170       CDS       T05557                                  Name (GenBank) recombinase RecJ   KO K07462   single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Organism haq  Haloplanus rubicundus CBA1112 Pathway haq03410   Base excision repair haq03430   Mismatch repair haq03440   Homologous recombination Brite KEGG Orthology (KO) [BR:haq00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     DU484_03170    03430 Mismatch repair     DU484_03170    03440 Homologous recombination     DU484_03170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:haq03400]     DU484_03170 DNA repair and recombination proteins [BR:haq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     RecJ      DU484_03170   DSBR (double strand breaks repair)    HR (homologous recombination)     RecFOR pathway proteins      DU484_03170    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       DU484_03170 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DHH_CID DHHA1 DHH DUF6003 Motif Other DBs NCBI-ProteinID:  AXG11722 UniProt:  A0A345EHQ0 LinkDB All DBs Position complement(456293..457714) Genome browser AA seq 473 aa AA seqDB search MDGPVPELADRAAACADRLRAADSVLLASHIDADGLTSAAVAATALERAGIPFDTVFEKQ LDEAAIRSIAATEHGTVLFTDFGSGQLDVVVEYADAFTPVVADHHQPADADVEFHCNPLL EGLNGASELSGAGAAYCVARALGGEANRDLAALAVVGAVGDMQAGVDGLTGANEAIVAEG VEAGVLREGTDLSMYGRQTRPLPKLLEYASDVRIPGISGDESGAVRFLADLDLDLRADGE WKRWVDLTDDERRTVASALLKRAVASGVPADRVNDLIGTTYTLTAEAEGTELRDVSEFST LLNATARYERADVGLAVCLGDRGEALDRARTLLRNHRKNLSEGLELVKSEGVTVEDHVQW FDAGTRIRETIVGIVAGMALGADGVRRDRPIVAFASVDAGESDGGDDEVKVSARGSHTLV RQGLDLSTVMREAARSVGGDGGGHDVAAGATIPAGTQAAFVAAADDLIADQLG NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atggacgggccggttcccgaactcgccgaccgggcggcggcgtgtgccgaccgcctccgg gcggccgactcggtgctcctcgcctcccacatcgacgccgacggcctgacgagcgccgcc gtggccgcgacggcgctcgaacgcgccggaatccccttcgatacggtcttcgagaaacag ctcgacgaggcggccatccgctccatcgccgcgacggagcacgggacggtcctctttacg gacttcgggagcgggcaactcgacgtcgtcgtcgagtacgccgacgccttcacgcccgtg gtcgcggaccaccaccagccggcggacgcggacgtcgagttccactgtaaccccctgctg gaggggctgaacggcgcgagcgaactgtccggcgcgggggcggcctactgcgtggcgcgg gcgctcggcggggaggccaaccgtgacctcgcggccctcgccgtcgtcggcgccgtcggc gacatgcaggccggcgtcgacggcctcactggcgccaacgaggccatcgtcgccgagggc gtcgaggcgggcgtcctacgcgagggaaccgatctgtcgatgtacggccggcagacccgg ccgctccccaagctactggagtacgccagcgacgtgcggattccggggatcagcggcgac gagtccggcgccgtgcgctttctcgccgatctcgatctcgacctccgggccgatggggag tggaaacggtgggtcgatctgaccgacgacgagcggcggacggtggcgagcgccctgctc aagcgggcggtggcgagcggcgtgccggcggatcgggtgaacgacctgatcgggacgacc tacaccctcaccgcggaggccgaagggacggaactccgcgacgtgagcgagttctcgacg ctcctgaacgcgacggcgcgctacgagcgcgcggacgtggggctggcagtgtgtctgggg gaccgaggcgaggcactcgaccgcgcccggacgctcctgcgcaaccaccgcaagaacctc tcggaggggctggaactcgtgaaatcggagggggtgaccgtcgaagaccacgtccagtgg ttcgacgcggggacgcgaatccgggagaccatcgtcggcatcgtcgccgggatggcgctg ggggcggacggcgtccgacgggaccggcccatcgtcgcgttcgcgagcgtggacgccggc gagtcggatggcggcgacgacgaggtgaaagtctccgcgcgggggtctcacaccctcgtt cggcagggactggatctctcgacggtcatgcgggaggcagcgcggtcggtcggcggcgac ggcggcggccacgacgtggctgcgggggcgacgattcccgccggcactcaagcggcgttc gtcgcggcggccgacgatctgatcgccgaccagttggggtag

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