Haloplanus rubicundus CBA1112: DU484_04280
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Entry
DU484_04280 CDS
T05557
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K07730
putative transcriptional regulator
Organism
haq
Haloplanus rubicundus CBA1112
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haq03000
]
DU484_04280
Transcription factors [BR:
haq03000
]
Prokaryotic type
Helix-turn-helix
Other families
DU484_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7839
MarR_2
HTH_24
HTH_IclR
HTH_Crp_2
HVO_A0261_N
MarR
HTH_5
FaeA
Rrf2
HTH_45
Mrr_N
TrmB
HTH_3
LexA_DNA_bind
DUF7343
HTH_11
HTH_PafC
NirdL-like_HTH
HTH_27
TetR_C_7
Mnd1
WHD_RNase_R
WHD_MCM8
DUF1967
HTH_10
Fe_dep_repress
HTH_23
CggR_N
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AXG09139
UniProt:
A0A345EAB7
LinkDB
All DBs
Position
673137..673937
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AA seq
266 aa
AA seq
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MAENADEGVLRSKRSATRYQILVGIAERQPAVSQREIADDIGITAQAVSDYLQGLIEEGY
VRSPGRGRYEVTKEGVDWLIGRTDELHEFVTHVSEDVIGQVEIETAIATADVAEGDAVSL
SMRDGVLRATPGTAGSTTAVAVTAAEAGRDVGVTDFEGVLDYDLGRVTAVSIPRVQDGGS
VAVASETLLAHADDCDLVATAGTEALVAARAAGLDPDVRFGTPQAVNEAAVRGLDVLLLA
VADELSTHLDRLREGTISYEVVDTAE
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgccgacgagggcgtcctccggagcaagcgctcggcgacccggtatcag
attctggtggggatcgcggagcgccaaccggcagtcagtcagcgggagatcgccgacgac
atcggcatcacggcacaggcagtgagcgactacctgcaggggctgatcgaggaggggtac
gtccggagtcccggccgtgggcgctacgaggtgaccaaagagggggtggactggctcatc
ggccggacggacgaactccacgagttcgtgacccacgtctcggaggacgtgatcgggcag
gtggagatcgagacggctatcgccaccgccgacgtcgccgagggcgacgccgtctcgctg
tcgatgcgcgacggcgtcctccgggcgacccccggcaccgcggggagcacaactgcggtt
gcggtcacggccgccgaggcggggcgcgacgtgggcgtcaccgacttcgagggcgtcctc
gactacgatctgggccgggtgaccgccgtctcgattccgcgggtgcaggacggcggcagc
gtcgccgtggcgagcgagacgctcctcgctcacgccgacgactgcgacctggtggcgacg
gcgggaaccgaggcgctagtggccgcgcgggcggccggcctcgaccccgacgtgcgcttc
ggcacgccgcaggcggtgaacgaggcggcggtccggggactcgacgtcctcctcctcgcc
gtcgcggacgaactctcgacgcatctggaccgtctccgcgaggggacgatcagctacgaa
gtcgtcgacactgcggagtga
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