Haloplanus rubicundus CBA1112: DU484_06905
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Entry
DU484_06905 CDS
T05557
Name
(GenBank) squalene/phytoene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq00100
Steroid biosynthesis
haq00909
Sesquiterpenoid and triterpenoid biosynthesis
haq01100
Metabolic pathways
haq01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
DU484_06905
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
DU484_06905
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
haq01006
]
DU484_06905
Enzymes [BR:
haq01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
DU484_06905
Prenyltransferases [BR:
haq01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DU484_06905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AXG09621
UniProt:
A0A345EBP9
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All DBs
Position
1151549..1152622
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AA seq
357 aa
AA seq
DB search
MSRHAARPPGDRADLEWCHEAVQGVSRTFALTVDVLDEPMASYICIGYLLCRVPDTIEDA
DHVPPTEQARLLREYDRVLDPADETGAEDFRASVDEWLPEPEGRSEDWNVVASTPRIVRT
FEALPEDVREAVTPPARELVQGMAMFVERYADEGGLRIQSREELEEYCYYAAGTVGNLVT
NLLARGDLSEGRRARLYDTAEEFGLLLQLVNVAKDVYDDYTEEDNVYLPAEWLAAEDVPQ
DEVLAPEHASGAAAVVRRTARHARSFLDDAQTYLETVPTTDGNTVAAWAIPFLLAVGTLR
ELLERPEDALSATGVKISRQEVFAVVTEMTGTPSDSLADLREDIAGQPYHRASGQAD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacgcagctagacctcccggtgaccgggccgacctcgaatggtgtcacgag
gcggtgcagggcgtctcccgaacgttcgcgttgaccgtcgacgtgctcgacgaaccgatg
gcgtcgtacatctgtatcggctacctcctctgtcgcgttcctgatactatcgaggacgcg
gaccacgttccgccgaccgaacaggcccgcctcctccgcgagtacgaccgggtgctcgat
ccggccgacgagaccggggccgaggacttccgggcgtcggtcgacgagtggctccccgag
ccggaggggcgatccgaggactggaacgtcgtcgccagcacgccacggatcgtccggacg
ttcgaggcgctccccgaggacgtccgggaggcggtcacgccgccggctcgcgaactcgtc
caggggatggcgatgttcgtcgagcgctacgccgacgagggcggcctccgcatccagtcc
cgcgaggaactggaggagtactgttactacgccgccggcaccgtcggcaacctggtcacc
aacctgctggcgcggggcgacctgagcgaggggcgccgcgcccggctctacgacaccgcc
gaggagttcggcctcctgctccagctggtcaacgtcgccaaggacgtttacgacgactac
accgaggaggacaacgtctacctgccggcggagtggctggccgccgaggacgttccacag
gacgaagtgctcgcgccggaacacgcgtcgggcgcggcggccgtcgtccggcgcaccgcc
cgccacgcgcggtcgttcctcgacgacgcccagacctacctggagacggtccccacgacg
gacggcaacaccgtcgcggcgtgggccatccccttcctgctcgcggtcgggacgctccgc
gaactgctcgaacgccccgaggacgccctctccgcgaccggggtcaagatttcgcgccag
gaggtgttcgccgtcgtcaccgagatgacgggaaccccctccgactcgctcgcggacctc
cgggaggatatcgccggccagccgtaccaccgggcgagcgggcaggcggactag
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