Haloplanus rubicundus CBA1112: DU484_06975
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Entry
DU484_06975 CDS
T05557
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
haq
Haloplanus rubicundus CBA1112
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haq03400
]
DU484_06975
DNA repair and recombination proteins [BR:
haq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DU484_06975
Archaeal homologous recombinant proteins
DU484_06975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
zf-C4H2
AAA_21
AAA_27
AAA_13
AAA_29
SHE3
Fib_alpha
CENP-F_leu_zip
GAS
COG6_N
ABC_tran
MscS_porin
DUF2813
Motif
Other DBs
NCBI-ProteinID:
AXG09634
UniProt:
A0A345EBR2
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All DBs
Position
1163986..1166670
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AA seq
894 aa
AA seq
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MKFDRIRLRNFRPYADADLDLRDGVTVIHGLNGSGKSSLLEACFFALYGSKALEGTLDDV
VSNGAEEAEIDLWFTHADAAYHVHRRLRASGERTTTADCVLEGPDATVEGARDVRAFVVD
LLRMDAEAFVNCAYVRQGEVNQLINASPAQRQDVIDDLLQLGRLEAYRDRAGDARLGIED
VRSGKRGELRKVESQIEEKEAENLYAALDDLESTLSEVDSQIDHYETQREKAQETKSEAE
AVLEEYESKRAELDSVEGDIDDLEAAIHEAESERETLRERVTEARERIDELDEKVDDRLD
AAGLDAATEAAVDRRRDELGEREAEIRETRTEANASATGLRNQATNLAEKADDLADRAAD
VEERAAELRAEADDAEATAEEREARVADLENEAAELAARFEDAPVDRGEAATRRDDLRER
RGEVRERVAELEAKLESATERVAEAEALLAAGKCPECGQPVADSPHADPEDDRERVAELE
SELADAREQVTTLDDRIDALDELVAAEERLAEIETEHDRLEDRVTEAHETAAEKREAAEK
REAEATDLRERAAETREVATQKRDEADEAAARVDELTAELESIAEARERVDAISERLERI
ADLEDEIERRRERAAGIEETNDERRERLAEKRDRRDELRDAVDEDAIESAREQRANAEEY
LENVADELDALGERRDSIQTKIGGVRGEIEALESLRDERDELAECVAALDALHEEAERLE
ATYGDLRAELRQRNVETLERLLNETFDLVYGNDAYAHLRLNGEYELSVVQKDGSELDPTQ
LSGGERALFNLSLRCAIYRLLAEGIDGAAPMPPLILDEPTVFLDSGHVSRLVDLVAEMRD
MGVAQIVIVSHDEELVGAADDLVRVEKDPRTNRSTVTRAESAVDELAAGITDDD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgaccggattcgcctgcggaacttccgcccgtacgcggacgccgacctcgac
ttgcgcgacggcgtgacggtcatccacggcctcaacgggagcggcaagtcgtcgctcttg
gaggcgtgtttcttcgcgctctacgggtcgaaagcgctggaggggaccctcgacgacgtg
gtctccaacggcgccgaggaggccgaaatcgacctgtggttcacccacgccgacgcggcc
taccacgtccaccgtcgcctccgggcgtcgggcgagcggacgaccaccgcggactgcgtg
ctggagggaccggacgcgacggtcgagggcgcccgcgacgtgcgggcgttcgtcgtcgac
ttgctgcggatggacgccgaggcgttcgtcaactgcgcgtacgtgcggcagggcgaggtg
aaccagttgatcaacgcctcgccggcccaacggcaggacgtgatcgacgacctcctgcag
ctcgggcgactggaggcgtaccgcgaccgggccggcgacgctcgactcggcatcgaggac
gtgcgctccgggaagcggggcgaactccggaaggtggagtcacagatcgaggagaaggag
gccgagaacctctacgccgcgctcgacgacctggagtcgacgctgtccgaggtggattcg
cagatcgaccactacgagacacagcgcgagaaggcccaagagacgaaaagtgaggccgaa
gcggtgctggaggagtacgaatcgaagcgggccgaactcgactcggtcgagggcgacatc
gacgacctggaggcggcgatccacgaggcggagtcggagcgcgagacgctgcgtgagcgg
gtaaccgaggcgcgcgagcggatcgacgaactggatgagaaggtcgacgaccgcctcgac
gcggcggggctggacgcggccacggaggcggccgtcgaccggcggcgtgacgaactcggc
gagcgcgaggccgagatacgggagacccgaaccgaggcgaacgcgtcggcgacggggctc
cggaatcaggcgacgaacctcgcggagaaggccgacgacctcgcggatcgggcggccgac
gtcgaagaacgcgcggcggagttgcgcgccgaggcggacgacgccgaggcgacggccgag
gagcgcgaggcgcgcgtcgccgacctggagaacgaggcggccgaactggccgcccggttc
gaggacgcgccggtcgaccgcggcgaggccgcgacccggcgggacgacctccgcgagcgc
cgcggtgaggtccgtgaacgcgtggccgaactcgaagccaaactggagtcggcgacggag
cgcgtcgcggaggccgaggcgttgctggcggcggggaaatgccccgagtgcgggcagccg
gtcgcggactcgccccacgccgaccccgaggacgaccgcgagcgggtcgcggaactggag
tccgaactggccgacgcacgcgagcaggtgacgacgctcgacgaccggatcgacgcgctc
gacgagttggtcgcggccgaggagcgactggccgaaatcgagacggagcacgaccggctc
gaggaccgcgtgacggaggcccatgagacggccgcagaaaaacgcgaggcggccgagaag
cgtgaggcggaggcgacggacctgcgcgagcgtgccgccgagacccgggaggtcgcgacc
cagaagcgcgacgaggccgacgaggccgcggcgcgggtcgacgagttgaccgccgagctg
gagtcgatagccgaggctcgcgagcgcgtcgacgccatttcggagcgcttggagcgaatc
gccgacctcgaagacgaaatcgagcgtcgtcgcgaacgggcggcgggcatcgaagagacc
aacgacgaacgccgggaacggctcgcggagaaacgcgaccgccgcgacgaactccgcgac
gccgtcgacgaggacgccatcgaatcggcccgcgagcagcgggcgaacgccgaggagtat
ctggagaacgtcgcggacgaactggacgcgctcggggagcgacgcgattcgatccagacg
aaaatcggcggcgtcagaggtgaaatcgaggcgctggagtcgcttcgggacgaacgcgac
gaactggccgagtgcgtcgccgccctcgatgccctccacgaggaggccgagcgcctcgaa
gccacgtacggcgatctgcgcgcggagcttcgccagcgcaacgtcgagacgctcgaacgc
ctcctcaacgagacgttcgacctcgtctacggcaacgacgcctacgcccacctccgcctg
aacggcgagtacgaactctcggtcgtccagaaggacggcagcgaactcgatccgacccag
ctgtcgggcggtgaacgcgccctgttcaacctcagcctgcggtgtgcgatctaccggctc
ctcgcggaggggatcgacggcgcggcgccgatgccgccgctcatcctcgacgagccgacc
gtctttctcgactcggggcacgtctcgcggctggtcgatctggtcgcggagatgcgcgac
atgggcgtagcgcagatcgtcatcgtgagccacgacgaggaactcgtcggcgcggccgac
gacctcgtgcgcgtcgagaaggatccgcggacgaaccgctcgacggtgacgcgggcggag
tcggcggtcgacgagctagcggccggcatcaccgacgacgactga
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