Haloplanus rubicundus CBA1112: DU484_07670
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Entry
DU484_07670 CDS
T05557
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_07670
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_07670
Prokaryotic type
Archaeal type
TFB
DU484_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AXG09745
UniProt:
A0A345EC23
LinkDB
All DBs
Position
1318956..1319900
Genome browser
AA seq
314 aa
AA seq
DB search
MPLKDVYERNFDEDVPAAGQSSRGCPECGGLVHTNSIETTCEDCGLVLEDRPIDHGSEWR
ALDGGERTERKRTGPPLTPARHDRGLSSEIGFDRTDANGIALSGRKTGQLARLRRENRRG
RWASKAEKNLAHGLSDVRRMSGALNLARSLRDQACQIFRIAAEQGLMRGRSIEAMTAASV
YAACRCAGLPRPLEEITAVAAVPHDRVQNAYTVLNRELRLPAMTVGPAGYIPRLASELDI
SPATRRRAADLARVMIAAGAISGCKPAGIAAACLYQAGLEQGERVTQRVLADAAGITPVT
LRTRWKHLQALLID
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccactgaaagatgtctatgagcggaacttcgacgaggacgttcccgctgccggccag
tccagtagaggctgtcccgagtgcggcggccttgtccacacgaacagcattgagacgacc
tgtgaagactgtgggttggtccttgaggatcgtccgattgaccacggctcggagtggcga
gcactcgacgggggcgagcgcaccgaacgaaagcgaactgggccaccgctgacgcctgcc
cgtcacgatcgcgggctatcgagtgagatcggcttcgaccggactgacgcgaacgggatt
gcgctgtcgggtcggaagaccgggcagcttgcccgcctccggcgagaaaatcgtcgaggg
cggtgggccagcaaggcagagaagaaccttgctcacgggctctctgatgtgcgacgaatg
agtggcgcactcaacttggcacgaagccttcgcgatcaggcctgccagatcttccggatc
gccgccgaacaaggtctcatgcgcggccgctcgatcgaggcgatgaccgctgcaagtgtc
tatgccgcctgccggtgtgctgggcttcctcggccgcttgaggaaatcacggctgtggcc
gccgtcccgcatgaccgcgtgcaaaatgcctacaccgttctcaaccgagaactccggctt
ccggcgatgacggttggtcctgctggatacatccctcgtctcgcctcagagctcgatatc
tcgccagcgactcgtcgacgggctgcggacctcgcccgcgtgatgatcgctgccggcgcc
atcagtggctgtaagccagccggtatcgcagcggcgtgtctctaccaggctgggctagag
caaggcgaacgagtgacacagcgtgtgctagctgatgcagcgggcattacgccggtgacg
ctacgtactcgctggaaacacctccaggccctcctcatcgactga
DBGET
integrated database retrieval system
