Haloplanus rubicundus CBA1112: DU484_10325
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Entry
DU484_10325 CDS
T05557
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haq
Haloplanus rubicundus CBA1112
Pathway
haq03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haq00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU484_10325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haq03021
]
DU484_10325
Transcription machinery [BR:
haq03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU484_10325
Prokaryotic type
Archaeal type
TFB
DU484_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
DZR_2
DZR
Cyclin_C
Trm112p
DUF5817
DUF7560
Zn_ribbon_PriA
Zn_ribbon_RRN7
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AXG10211
UniProt:
A0A345E3R5
LinkDB
All DBs
Position
complement(1841768..1842748)
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AA seq
326 aa
AA seq
DB search
MSQQPETLRETGGEQRSTTTETDERVCPECDASLVVDESHGETVCEACGLVVEADGIDHG
PEWRAFDSSERAEKSRVGAPTTKLLHDDGLSSVIDWQDRDAKGRTIDGSKRRKLQRLRTW
DERFRSKSAQERNLKQALGEIDRMSSALGLPETVRETASVVYRRALEDDLLRGRSIEAMA
TASLYAAARQASVPRSLDEFEPVSRVDRKEFSRAYRYIVRELGLAIEPANPLEYLPRFAS
DLDLDGDTTTRARALLEEGMESGVHSGKSPVGLAAAALYAASILEGDKVTQKEVCSVSDV
SEVTVRNRYTELLEAGTDPDAARGAA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcagcccgaaaccctccgagagaccggcggggaacagcgttcgacaaccacc
gagacggacgagcgcgtctgtccggagtgtgacgcgtcgctggtcgtggacgagtcccac
ggcgagacggtgtgtgaggcgtgtggtctcgtcgtcgaggcagacgggatcgatcacggt
cccgagtggcgcgccttcgactccagcgagcgcgcggagaagagccgcgtcggcgcgccg
acgaccaaactcctccacgacgatggcctctcctcggtcatcgactggcaggaccgcgac
gccaagggtcgaaccatcgacgggagcaagcgccggaagctccagcgcctgcgcacgtgg
gacgagcgcttccgctcgaagagcgctcaggagcgcaacctgaagcaggctctcggcgaa
atcgaccggatgtcgtcggcgctcggtctcccagaaaccgtccgcgagacggcgagcgtc
gtctaccgtcgggcgctggaggacgacctcctgcgcgggcgctccatcgaggcgatggcg
accgcctccctgtacgccgccgctcggcaggcgtcggtgccccggagcctcgacgagttc
gaacccgtcagccgcgtcgaccgcaaggagttctcgcgggcctaccgctacatcgtccgc
gaactcggtctcgccatcgaaccggccaatcccctcgaatacctcccccggttcgcctcc
gacctcgacctcgacggcgacacgacgacccgcgcccgcgccctcctcgaagagggcatg
gagagcggcgtccacagcggcaagagtcccgtcggtctcgcggcggcggcgctctacgcc
gcctcgatactcgaaggcgataaagtgacccagaaggaggtctgctcggttagcgacgtc
tccgaagtgaccgtccgcaaccgctacaccgaactcctcgaagccggcaccgatcccgac
gcggcccgcggcgccgcgtag
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