Haloplanus rubicundus CBA1112: DU484_14100 Help Entry DU484_14100       CDS       T05557                                  Name (GenBank) AAA family ATPase   KO K13525   transitional endoplasmic reticulum ATPase Organism haq  Haloplanus rubicundus CBA1112 Pathway haq04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:haq00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     DU484_14100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:haq03019]     DU484_14100    03009 Ribosome biogenesis [BR:haq03009]     DU484_14100    04131 Membrane trafficking [BR:haq04131]     DU484_14100   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:haq04147]     DU484_14100 Messenger RNA biogenesis [BR:haq03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      DU484_14100 Ribosome biogenesis [BR:haq03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     DU484_14100 Membrane trafficking [BR:haq04131]  SNARE   SNARE associated proteins    Others     DU484_14100  Autophagy   Aggrephagy    Other aggrephagy associated proteins     DU484_14100 Exosome [BR:haq04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    DU484_14100 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N CDC48_2 AAA_16 RuvB_N AAA_2 TIP49 AAA_5 AAA_14 AAA_22 AAA_33 NPHP3_N nSTAND3 RNA_helicase AAA_28 AAA_7 Mg_chelatase IstB_IS21 DUF815 AAA_3 NB-ARC AAA_17 AAA_lid_PRS2_C AAA_18 SLFN-g3_helicase Sigma54_activat AAA_30 Parvo_NS1 ABC_tran AAA_11 PhoH TsaE AAA_24 Zeta_toxin AAA_19 ATPase_2 bpMoxR Bac_DnaA Motif Other DBs NCBI-ProteinID:  AXG10885 UniProt:  A0A345E5J8 LinkDB All DBs Position complement(2551296..2553563) Genome browser AA seq 755 aa AA seqDB search MKLVVKPLKQKDAGRGLAAIDRAAVAEMGLEVGDYIRIEGKEGTAIARVWPGHPEDQGSG VIRIDGQLRQQANVGIDDRVEVEKADVKQAERVTVALPQQIGIRGDIGHYLRDKLTDKPI TKGQTLRVPFGFGFMSGRQSQALPLKVADTDPSGTVVVTDSTEVTVSEKPAEQIRESGGE ARADTPDVTYEDIGGLDRELEQVREMIELPMRHPELFRRLGIDPPKGVLLHGPPGTGKTL IAKAVANEIDAHFHTISGPEIMSKYYGESEEQLRDAFEEAEENAPAIVFIDEIDSIAPER GEAGGDVERRVVAQLLSLMDGLEERGEVVVIGATNRVDAIDPALRRGGRFDREIEIGVPD RDGRREILQVHTRNMPLAEDVNIEGFAESTHGFVGADIESLAKEAAMNALRRIRPQIDLE EEEIDAEILEDLEVGQDDFQEAMKGIEPSALREVFVEVPDVTWNDVGGLEDTKERLRETI QWPLDYPEVFEAMDMESAKGVLMYGPPGTGKTLLAKAVANEAESNFISVKGPELLDKYVG ESEKGVREIFSKARENAPTVIFFDEIDAIATERGRNTGDSGVSERVVSQLLTELDGLETL EDVVVIATSNRPDLIDSALLRPGRLDRHVHVPVPDEEARRAIFEVHTRDKPLADDVDLDS LARRTENYVGADIEAVCREASMAASREFIHSVSPEEIGESIGNVRITMDHFEQALEEVTA SVTDDVRERYREIEQRFTTDEPDVGTETEASRTFH NT seq 2268 nt NT seq  +upstreamnt  +downstreamnt atgaagctcgtcgtcaaaccactgaaacagaaagacgccggccgtggactggccgccatc gaccgcgccgcggtcgcggagatggggctggaggtcggcgactacatccgcatcgagggg aaagagggcacggccatcgcgcgcgtctggcccggtcaccccgaggaccaggggtcgggc gtcatccgcatcgacggccagctccgccagcaggccaacgtcggcatcgacgaccgcgtc gaagtcgagaaggcggacgtgaaacaggccgaacgggtgacggtcgcgctcccccagcag atcggtatccggggcgacatcggccactacctccgtgacaagctgaccgacaagccgatc acgaagggacagaccctccgtgtccccttcggcttcggcttcatgagcggtcggcagagt caggcgctcccgctgaaggtcgccgacaccgacccgtccggcaccgtcgtcgtcaccgac tcgaccgaggtgacggtcagcgagaagcccgccgaacagatccgcgagtcgggcggcgag gcccgcgccgacacgccggacgtgacctacgaggacatcggcggtctcgaccgcgaactc gaacaggttcgcgagatgatcgagctgccgatgcgccaccccgaactgttccggcgcctc ggcatcgacccgccgaagggcgtgctcctccacggcccgcccggcaccgggaagacgctc atcgccaaggctgtcgccaacgaaatcgacgcccacttccacaccatcagtgggccggag atcatgtcgaaatactacggcgagagcgaggagcaactccgcgacgccttcgaggaagcc gaggagaacgcccccgccatcgtcttcatcgacgaaatcgactccatcgcccccgagcgt ggcgaggccggcggcgacgtcgaacgccgcgtcgtcgcgcagctactcagcctgatggac gggctggaggagcgcggcgaggtcgtggtcatcggcgcgaccaaccgcgtcgacgccatc gaccccgcgctccgccgcggcggccggttcgaccgcgagatcgagatcggcgtccccgac cgcgacggccggcgcgagatcctgcaggtccacacccgcaacatgccgctcgccgaggac gtgaacatcgagggcttcgccgagtccacgcacgggttcgtcggtgccgacatcgagagc ctcgccaaagaggccgcgatgaacgcgctccggcgcatccgcccgcagatcgacctcgag gaggaggagatcgacgccgagatcctggaggatctggaggtcggccaggacgacttccag gaggcgatgaaaggtatcgaaccctccgcgctgcgggaagtgttcgtcgaggtacccgac gtgacctggaacgacgtgggcggtctggaggacaccaaagagcgcctccgcgagaccatc cagtggccgctcgactaccccgaggtgttcgaggccatggacatggagtccgcgaagggc gttctcatgtacggcccgcccgggaccgggaagaccttactcgccaaggcggtcgccaac gaggccgagtccaacttcatctcggtgaaggggcccgaactcctcgataagtacgtcggg gagagcgagaagggggtccgcgagatcttcagcaaggcccgcgagaacgcgccgaccgtc atcttcttcgacgagatcgacgccatcgcgaccgagcgcggccgcaacaccggcgactcc ggcgtctccgagcgcgtcgtctcccaactactgacggagctcgacggcctcgaaacgctg gaggacgtggtggtcatcgccacctcgaaccggcccgacctgatcgactccgcgctcctg cgccccggccgcctggaccggcacgtccacgtgcccgtccccgacgaggaggcgcgccgc gccatcttcgaggtccacacgcgggacaagccgctcgcggacgacgtggacctggatagc ctcgcccgccggaccgagaactacgtcggcgccgacatcgaggccgtctgccgcgaagcc tcgatggccgccagccgcgagttcatccacagcgtctcgcccgaggagatcggcgagtcc atcgggaacgtccgcatcacgatggaccacttcgagcaggcgctcgaggaagtgaccgcg agcgtcaccgacgacgtgcgcgagcgctaccgcgaaatcgagcagcggttcacgaccgac gaacccgacgtgggcaccgaaaccgaagcgagtcggacgttccactag

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